RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YDC1Q02896 317 aa2.86□□□□□ -1.95
NUP60YAR002W SNO1Q03144 224 aa2.86□□□□□ -1.95
NUP60YAR002W ADD37Q03233 198 aa2.86□□□□□ -1.95
NUP60YAR002W YMR090WQ04304 227 aaKnown RBP2.86□□□□□ -1.95
NUP60YAR002W GMC1Q04399 608 aa2.86□□□□□ -1.95
NUP60YAR002W FIT1Q04433 528 aa2.86□□□□□ -1.95
NUP60YAR002W RIM9Q04734 239 aa2.86□□□□□ -1.95
NUP60YAR002W YPD1Q07688 167 aa2.86□□□□□ -1.95
NUP60YAR002W PAM18Q07914 168 aa2.86□□□□□ -1.95
NUP60YAR002W YOL024WQ08172 172 aa2.86□□□□□ -1.95
NUP60YAR002W YOR292CQ08743 309 aa2.86□□□□□ -1.95
NUP60YAR002W AGC1Q12482 902 aa2.86□□□□□ -1.95
NUP60YAR002W FOL3Q12676 427 aaPredicted RBP2.86□□□□□ -1.95
NUP60YAR002W YNL162W-AQ3E7A8 72 aa2.86□□□□□ -1.95
NUP60YAR002W CDC39P25655 2108 aaKnown RBP2.86□□□□□ -1.95
NUP60YAR002W ERV1P27882 189 aa2.86□□□□□ -1.95
NUP60YAR002W RIB5P38145 238 aa2.86□□□□□ -1.95
NUP60YAR002W PCL7P40186 285 aa2.86□□□□□ -1.95
NUP60YAR002W PGD1P40356 397 aa2.86□□□□□ -1.95
NUP60YAR002W ERG25P53045 309 aa2.86□□□□□ -1.95
NUP60YAR002W RPN14P53196 417 aa2.86□□□□□ -1.95
NUP60YAR002W YPL067CQ02754 198 aa2.86□□□□□ -1.95
NUP60YAR002W TMA23Q03525 211 aa2.86□□□□□ -1.95
NUP60YAR002W PRP11Q07350 266 aaPredicted RBP2.86□□□□□ -1.95
NUP60YAR002W YFH1Q07540 174 aa2.86□□□□□ -1.95
NUP60YAR002W SWT1Q12104 458 aa2.86□□□□□ -1.95
NUP60YAR002W YOR015WQ12169 119 aa2.86□□□□□ -1.95
NUP60YAR002W RNH203Q12338 110 aa2.86□□□□□ -1.95
NUP60YAR002W ATG5Q12380 294 aa2.86□□□□□ -1.95
NUP60YAR002W SEN1Q00416 2231 aaKnown RBP2.85□□□□□ -1.95
NUP60YAR002W YDR157WA0A023PZE8 133 aa2.85□□□□□ -1.95
NUP60YAR002W IPP1P00817 287 aaKnown RBP2.85□□□□□ -1.95
NUP60YAR002W YCR025CP25352 136 aa2.85□□□□□ -1.95
NUP60YAR002W YOX1P34161 385 aa2.85□□□□□ -1.95
NUP60YAR002W UBC13P52490 153 aa2.85□□□□□ -1.95
NUP60YAR002W PDR17P53844 350 aa2.85□□□□□ -1.95
NUP60YAR002W YMR253CQ04835 414 aa2.85□□□□□ -1.95
NUP60YAR002W ZEO1Q08245 113 aa2.85□□□□□ -1.95
NUP60YAR002W YPL264CQ08980 353 aa2.85□□□□□ -1.95
NUP60YAR002W FCY22Q12119 530 aa2.85□□□□□ -1.95
NUP60YAR002W RDL1Q12305 139 aaKnown RBP2.85□□□□□ -1.95
NUP60YAR002W PRR2Q12310 699 aa2.85□□□□□ -1.95
NUP60YAR002W DGK1Q12382 290 aa2.85□□□□□ -1.95
NUP60YAR002W UPS2P35200 230 aa2.84□□□□□ -1.95
NUP60YAR002W ATG8P38182 117 aaRIP-Chip data2.84□□□□□ -1.95not detected
NUP60YAR002W SEN34P39707 275 aa2.84□□□□□ -1.95
NUP60YAR002W RMD6P39975 231 aa2.84□□□□□ -1.95
NUP60YAR002W GON7P46984 123 aa2.84□□□□□ -1.95
NUP60YAR002W MOG1P47123 218 aa2.84□□□□□ -1.95
NUP60YAR002W XPT1P47165 209 aa2.84□□□□□ -1.95
NUP60YAR002W GEP7P53171 287 aa2.84□□□□□ -1.95
NUP60YAR002W YGR050CP53231 118 aa2.84□□□□□ -1.95
NUP60YAR002W HSK3P69852 69 aa2.84□□□□□ -1.95
NUP60YAR002W API2Q04413 109 aa2.84□□□□□ -1.95
NUP60YAR002W FSH2Q05015 223 aa2.84□□□□□ -1.95
NUP60YAR002W LIP2Q06005 328 aa2.84□□□□□ -1.95
NUP60YAR002W YLR179CQ06252 201 aaKnown RBP2.84□□□□□ -1.95
NUP60YAR002W HRD1Q08109 551 aa2.84□□□□□ -1.95
NUP60YAR002W YPL278CQ08990 100 aa2.84□□□□□ -1.95
NUP60YAR002W YPR145C-AQ2V2P0 78 aa2.84□□□□□ -1.95
NUP60YAR002W BOL1Q3E793 110 aa2.84□□□□□ -1.95
NUP60YAR002W GCN1P33892 2672 aaKnown RBP2.84□□□□□ -1.96
NUP60YAR002W ADH3P07246 375 aaKnown RBP2.83□□□□□ -1.96
NUP60YAR002W RPS23AP0CX29 145 aaKnown RBP2.83□□□□□ -1.96
NUP60YAR002W RPS23BP0CX30 145 aa2.83□□□□□ -1.96
NUP60YAR002W MAK32P23060 363 aa2.83□□□□□ -1.96
NUP60YAR002W ROX3P25046 220 aa2.83□□□□□ -1.96
NUP60YAR002W ELO2P25358 347 aa2.83□□□□□ -1.96
NUP60YAR002W LSB5P25369 354 aa2.83□□□□□ -1.96
NUP60YAR002W AHT1P29589 182 aa2.83□□□□□ -1.96
NUP60YAR002W FLO5P38894 1075 aa2.83□□□□□ -1.96
NUP60YAR002W GTT1P40582 234 aa2.83□□□□□ -1.96
NUP60YAR002W HXT14P42833 540 aa2.83□□□□□ -1.96
NUP60YAR002W SMD3P43321 101 aaKnown RBP2.83□□□□□ -1.96
NUP60YAR002W TTI2P47168 421 aa2.83□□□□□ -1.96
NUP60YAR002W YGL260WP53056 76 aa2.83□□□□□ -1.96
NUP60YAR002W YGR026WP53217 278 aa2.83□□□□□ -1.96
NUP60YAR002W TIM21P53220 239 aa2.83□□□□□ -1.96
NUP60YAR002W PAU4P53427 120 aa2.83□□□□□ -1.96
NUP60YAR002W WSC2P53832 503 aa2.83□□□□□ -1.96
NUP60YAR002W YDR114CQ04597 100 aa2.83□□□□□ -1.96
NUP60YAR002W YDL218WQ07629 317 aa2.83□□□□□ -1.96
NUP60YAR002W GAT3Q07928 141 aa2.83□□□□□ -1.96
NUP60YAR002W COX17Q12287 69 aa2.83□□□□□ -1.96
NUP60YAR002W SNU23Q12368 194 aaPredicted RBP2.83□□□□□ -1.96
NUP60YAR002W YMR31P19955 123 aa2.82□□□□□ -1.96
NUP60YAR002W SPO13P23624 291 aa2.82□□□□□ -1.96
NUP60YAR002W CDC50P25656 391 aa2.82□□□□□ -1.96
NUP60YAR002W LAC1P28496 418 aa2.82□□□□□ -1.96
NUP60YAR002W CPR5P35176 225 aa2.82□□□□□ -1.96
NUP60YAR002W RPL14AP36105 138 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W MRPL4P36517 319 aa2.82□□□□□ -1.96
NUP60YAR002W CUE1P38428 203 aa2.82□□□□□ -1.96
NUP60YAR002W YHL037CP38733 133 aa2.82□□□□□ -1.96
NUP60YAR002W RPL14BP38754 138 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W YHR138CP38841 114 aaPredicted RBP2.82□□□□□ -1.96
NUP60YAR002W COX15P40086 486 aa2.82□□□□□ -1.96
NUP60YAR002W VMA21P41806 77 aa2.82□□□□□ -1.96
NUP60YAR002W NSE4P43124 402 aa2.82□□□□□ -1.96
NUP60YAR002W YFL051CP43552 160 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms