RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
PHGDH-216ENST00000641375 CCDC151A5D8V7 595 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 PAEPP09466 180 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 GDF6Q6KF10 455 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-216ENST00000641375 ALKAL1Q6UXT8 129 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 NXF3Q9H4D5 531 aaKnown RBP17.51■□□□□ 0.39
PHGDH-216ENST00000641375 PCDHGC3Q9UN70 934 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
PHGDH-216ENST00000641375 MED7O43513 233 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 RECQL4O94761 1208 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
PHGDH-216ENST00000641375 KCNA10Q16322 511 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 PTPROQ16827 1216 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 PASD1Q8IV76 773 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 UBL4BQ8N7F7 174 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CARD9Q9H257 536 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 ADAM22Q9P0K1 906 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CEP104O60308 925 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 TNNC1P63316 161 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 MESDQ14696 234 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CLUL1Q15846 466 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 ZBTB6Q15916 424 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 WDR93Q6P2C0 686 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 USP38Q8NB14 1042 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CD99L2Q8TCZ2 262 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 MRPL47Q9HD33 250 aaKnown RBP17.5■□□□□ 0.39
PHGDH-216ENST00000641375 EHD2Q9NZN4 543 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 HES2Q9Y543 173 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 CDY2AQ9Y6F7 541 aa17.5■□□□□ 0.39
PHGDH-216ENST00000641375 PGRMC1O00264 195 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 XPOTO43592 962 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 CFHP08603 1231 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 CCSAPQ6IQ19 270 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 FAM228AQ86W67 206 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RASGEF1CQ8N431 466 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RAET1EQ8TD07 263 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 PXYLP1Q8TE99 480 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 PNKPQ96T60 521 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.49■□□□□ 0.396e-10■■■■□ 22.4
PHGDH-216ENST00000641375 WNT8AQ9H1J5 351 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 SMARCAL1Q9NZC9 954 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 DDX20Q9UHI6 824 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 UBQLN1Q9UMX0 589 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 SCINQ9Y6U3 715 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 THSD7BQ9C0I4 1608 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 DDX3YO15523 660 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 CILPO75339 1184 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 ERLIN1O75477 346 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RRM1P23921 792 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RAP1GAPP47736 663 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 GLE1Q53GS7 698 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 UBXN11Q5T124 520 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 TWF2Q6IBS0 349 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RNF180Q86T96 592 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 RUBCNQ92622 972 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 ZMAT2Q96NC0 199 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 SMYD3Q9H7B4 428 aa17.49■□□□□ 0.39
PHGDH-216ENST00000641375 TTC7AQ9ULT0 858 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 NOC2LQ9Y3T9 749 aaKnown RBP17.49■□□□□ 0.39
PHGDH-216ENST00000641375 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
PHGDH-216ENST00000641375 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 CABYRO75952 493 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 ATF7P17544 494 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-216ENST00000641375 COMTP21964 271 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 CDH5P33151 784 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-216ENST00000641375 CDH8P55286 799 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 HNRNPLLQ8WVV9 542 aaKnown RBP17.48■□□□□ 0.39
PHGDH-216ENST00000641375 C11orf70Q9BRQ4 267 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 SDCBP2Q9H190 292 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 ARFGAP3Q9NP61 516 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 RBM12Q9NTZ6 932 aaKnown RBP17.48■□□□□ 0.39
PHGDH-216ENST00000641375 ANAPC7Q9UJX3 599 aa17.48■□□□□ 0.39
PHGDH-216ENST00000641375 CD4P01730 458 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 CALB1P05937 261 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 CD19P15391 556 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 MMP8P22894 467 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 AKAP5P24588 427 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 RAD23BP54727 409 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 FAM193AP78312 1265 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 INCA1Q0VD86 236 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 TMEM176AQ96HP8 235 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-216ENST00000641375 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 LHX5Q9H2C1 402 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms