RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 POU5F1Q01860 360 aaKnown RBP23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 ITIH3Q06033 890 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 KCNA10Q16322 511 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 DAB2IPQ5VWQ8 1189 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 WHAMMQ8TF30 809 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 ADAM22Q9P0K1 906 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 ITGA11Q9UKX5 1188 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 CDY2AQ9Y6F7 541 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 KPNA6O60684 536 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 TRIM72Q6ZMU5 477 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 CELF4Q9BZC1 486 aaKnown RBP23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 OSBPL7Q9BZF2 842 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 UVRAGQ9P2Y5 699 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 RNF14Q9UBS8 474 aa23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 DMGDHQ9UI17 866 aaKnown RBP23.07■■□□□ 1.28
CHRNA7-228ENST00000637519 YARSP54577 528 aaKnown RBP23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 RAD23BP54727 409 aa23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 MRPS6P82932 125 aaKnown RBP23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 PTP4A2Q12974 167 aa23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 TAF2Q6P1X5 1199 aa23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 ELOVL4Q9GZR5 314 aa23.06■■□□□ 1.28
CHRNA7-228ENST00000637519 CCDC151A5D8V7 595 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 SPDYE4A6NLX3 237 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 CES2O00748 559 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 RBP5P82980 135 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 KLHL7Q8IXQ5 586 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 KRT12Q99456 494 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 CREBZFQ9NS37 354 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 PARP2Q9UGN5 583 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 SRRDQ9UH36 339 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 THSD7BQ9C0I4 1608 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ZRANB2O95218 330 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ITGA4P13612 1032 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ATICP31939 592 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 DENND1BQ6P3S1 775 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 APBB1IPQ7Z5R6 666 aaPredicted RBP23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ADAT2Q7Z6V5 191 aaKnown RBP23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 NME8Q8N427 588 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 WDTC1Q8N5D0 677 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ARRDC4Q8NCT1 418 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ACTRT1Q8TDG2 376 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 ZBTB9Q96C00 473 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 SELENOOQ9BVL4 669 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 GRIN2DO15399 1336 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 CASP8AP2Q9UKL3 1982 aa23.05■■□□□ 1.28
CHRNA7-228ENST00000637519 RALGAPA2Q2PPJ7 1873 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 PGRMC1O00264 195 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 SPOPO43791 374 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 CILPO75339 1184 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 MYBL2P10244 700 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 AXLP30530 894 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 BRD3Q15059 726 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 PCBP1Q15365 356 aaKnown RBP eCLIP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 TWF2Q6IBS0 349 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 PHF13Q86YI8 300 aaPredicted RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 SLC4A11Q8NBS3 891 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 VRTNQ9H8Y1 702 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 PLEKHA5Q9HAU0 1116 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 GOLGA2P5Q9HBQ8 144 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 AVENQ9NQS1 362 aaPredicted RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 IPPQ9Y573 584 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 YWHAEP62258 255 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 C8orf74Q6P047 294 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 ALKAL1Q6UXT8 129 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 DPH6Q7L8W6 267 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 CD302Q8IX05 232 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 RASGEF1CQ8N431 466 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 SMG8Q8ND04 991 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 CD101Q93033 1021 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 RNPC3Q96LT9 517 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 ARFGAP3Q9NP61 516 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 CNTN3Q9P232 1028 aa23.04■■□□□ 1.28
CHRNA7-228ENST00000637519 ZSCAN5CA6NGD5 496 aaPredicted RBP23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 MEIS3P2A8K0S8 358 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 SASH3O75995 380 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 FGGP02679 453 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 CHRNA1P02708 482 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 MYBL1P10243 752 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 TNNC1P63316 161 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 NFX1Q12986 1120 aaKnown RBP23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 ZBTB6Q15916 424 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 LONRF2Q1L5Z9 754 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 WDR93Q6P2C0 686 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 SESTD1Q86VW0 696 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 KLHDC9Q8NEP7 349 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 TJP2Q9UDY2 1190 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 TMEM59LQ9UK28 342 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 NR2E1Q9Y466 385 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 TRPV2Q9Y5S1 764 aa23.03■■□□□ 1.28
CHRNA7-228ENST00000637519 MMP8P22894 467 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 MAMLD1Q13495 774 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 CYP4A22Q5TCH4 519 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 CCSAPQ6IQ19 270 aaPredicted RBP23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 NT5DC4Q86YG4 428 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 TRIM11Q96F44 468 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 CYTH4Q9UIA0 394 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 SCN1AP35498 2009 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 TARSL2A2RTX5 802 aaKnown RBP23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 M0QZ92 97 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms