RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NEK11Q8NG66 645 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 TIFAQ96CG3 184 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 TTYH1Q9H313 450 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-208ENST00000634934 AAASQ9NRG9 546 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 POLIQ9UNA4 740 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 SNX9Q9Y5X1 595 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 I3L4J1 428 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 STAU1O95793 577 aaKnown RBP15.48■□□□□ 0.07
LINC00339-208ENST00000634934 P4HA1P13674 534 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PBX1P40424 430 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 BRCC3P46736 316 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 FAM193AP78312 1265 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 RAB30Q15771 203 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 KLHDC7AQ5VTJ3 777 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PHLDB3Q6NSJ2 640 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 CD300LGQ6UXG3 332 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 VSTM4Q8IW00 320 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 ARHGEF19Q8IW93 802 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PPM1KQ8N3J5 372 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 MMS19Q96T76 1030 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 NIF3L1Q9GZT8 377 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 SIX2Q9NPC8 291 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 UBE2TQ9NPD8 197 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PLCB1Q9NQ66 1216 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 MSRAQ9UJ68 235 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 ADAM28Q9UKQ2 775 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 PCDHB12Q9Y5F1 795 aa15.48■□□□□ 0.07
LINC00339-208ENST00000634934 EYSQ5T1H1 3165 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 LINC01553A4QN01 128 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 TMEM189-UBE2V1I3L0A0 370 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 CYB561D2O14569 222 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 TRIM21P19474 475 aaKnown RBP15.47■□□□□ 0.07
LINC00339-208ENST00000634934 TIGD5Q53EQ6 642 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 TMC6Q7Z403 805 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 TMEM173Q86WV6 379 aaPredicted RBP15.47■□□□□ 0.07
LINC00339-208ENST00000634934 SENP8Q96LD8 212 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 VRTNQ9H8Y1 702 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 MARCH5Q9NX47 278 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 SPG21Q9NZD8 308 aa15.47■□□□□ 0.07
LINC00339-208ENST00000634934 CARNS1A5YM72 827 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 GOLGA6L9A6NEM1 432 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 EPHB6O15197 1021 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 TRAPPC3O43617 180 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 HUS1O60921 280 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 CTNNB1P35222 781 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 POLR2FP61218 127 aaKnown RBP15.46■□□□□ 0.07
LINC00339-208ENST00000634934 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 DPY19L2P1Q6NXN4 242 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 SLC39A11Q8N1S5 342 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 BCL7CQ8WUZ0 217 aaPredicted RBP15.46■□□□□ 0.07
LINC00339-208ENST00000634934 CLP1Q92989 425 aaKnown RBP15.46■□□□□ 0.07
LINC00339-208ENST00000634934 KAT5Q92993 513 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 IGSF21Q96ID5 467 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 ARID3AQ99856 593 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 SMYD3Q9H7B4 428 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 CERS4Q9HA82 394 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 OGFRQ9NZT2 677 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 DNAJC12Q9UKB3 198 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 FHOD1Q9Y613 1164 aa15.46■□□□□ 0.07
LINC00339-208ENST00000634934 KIAA1671Q9BY89 1806 aa15.46■□□□□ 0.06
LINC00339-208ENST00000634934 NOL4O94818 638 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 WEE2P0C1S8 567 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 UCHL3P15374 230 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 PAX3P23760 479 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 TBXAS1P24557 533 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 PPM1AP35813 382 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 ASPAP45381 313 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 RAP1GAPP47736 663 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 CUL2Q13617 745 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 ARHGAP44Q17R89 818 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 E4F1Q66K89 784 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 IQCEQ6IPM2 695 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 FUT10Q6P4F1 479 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 DEFB123Q8N688 67 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 CPLX3Q8WVH0 158 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 TMEM169Q96HH4 297 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 GANQ9H2C0 597 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 SLC28A3Q9HAS3 691 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 NLRC4Q9NPP4 1024 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 MTUS1Q9ULD2 1270 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 TIMM13Q9Y5L4 95 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 SCN1AP35498 2009 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 TRANK1O15050 2925 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 NLRC5Q86WI3 1866 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-208ENST00000634934 ITIH6Q6UXX5 1313 aa15.45■□□□□ 0.06
LINC00339-208ENST00000634934 LINC00271P0C7V0 271 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 ODC1P11926 461 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 CD58P19256 250 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 BMPR1AP36894 532 aa15.44■□□□□ 0.06
LINC00339-208ENST00000634934 MFAP3P55082 362 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms