RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 LSM14BQ9BX40 385 aaKnown RBP8.94□□□□□ -0.98
MECP2-220ENST00000631210 TTYH1Q9H313 450 aaPredicted RBP8.94□□□□□ -0.98
MECP2-220ENST00000631210 GRPEL1Q9HAV7 217 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 SPG21Q9NZD8 308 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 HMGXB4Q9UGU5 601 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 CNTN6Q9UQ52 1028 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 TIMM13Q9Y5L4 95 aaPredicted RBP8.94□□□□□ -0.98
MECP2-220ENST00000631210 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 REV3LO60673 3130 aa8.94□□□□□ -0.98
MECP2-220ENST00000631210 CYB561D2O14569 222 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 FSCN2O14926 492 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 GRM6O15303 877 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ADAM12O43184 909 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 TACC1O75410 805 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 TADA2AO75478 443 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 OAZ2O95190 189 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 SOD2P04179 222 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 RB1P06400 928 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 PNMA6AP0CW24 399 aaPredicted RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 UCHL3P15374 230 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 PAX3P23760 479 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 CTNNB1P35222 781 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 JAM2P57087 298 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ERVFC1P60507 584 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 GCNT1Q02742 428 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 INCA1Q0VD86 236 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 CUL2Q13617 745 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 GSE1Q14687 1217 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 RAB30Q15771 203 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 CCDC142Q17RM4 750 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 SV2CQ496J9 727 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ZNF667Q5HYK9 610 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 FKBP15Q5T1M5 1219 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 E4F1Q66K89 784 aaPredicted RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 RRAGAQ7L523 313 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 DPH6Q7L8W6 267 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 DDX53Q86TM3 631 aaKnown RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 TOP6BLQ8N6T0 577 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ANKRD20A12PQ8NF67 263 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 OLIG1Q8TAK6 271 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 LNX1Q8TBB1 728 aaPredicted RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 BAP1Q92560 729 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ZNF560Q96MR9 790 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 NT5C1BQ96P26 610 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 TWNKQ96RR1 684 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 TGS1Q96RS0 853 aaKnown RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 PKMYT1Q99640 499 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ZSWIM1Q9BR11 485 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 HERC2P3Q9BVR0 1158 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 PLVAPQ9BX97 442 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 NIF3L1Q9GZT8 377 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ZBP1Q9H171 429 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 CERS4Q9HA82 394 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ALG13Q9NP73 1137 aaKnown RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 NXF1Q9UBU9 619 aaKnown RBP8.93□□□□□ -0.98
MECP2-220ENST00000631210 FBXL5Q9UKA1 691 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 PCDHB8Q9UN66 801 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 SNX9Q9Y5X1 595 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 ITIH6Q6UXX5 1313 aa8.93□□□□□ -0.98
MECP2-220ENST00000631210 SF3B1O75533 1304 aaKnown RBP eCLIP8.92□□□□□ -0.989e-8■■■■■ 46.8
MECP2-220ENST00000631210 GOLGA6L3A6NEY3 463 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 H3BNC9 293 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 RFXAPO00287 272 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 PES1O00541 588 aaKnown RBP8.92□□□□□ -0.98
MECP2-220ENST00000631210 SYN3O14994 580 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 CILPO75339 1184 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 VNN2O95498 520 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 ADCY5O95622 1261 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 GYPCP04921 128 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 TYMPP19971 482 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 WARSP23381 471 aaKnown RBP8.92□□□□□ -0.98
MECP2-220ENST00000631210 LMO2P25791 158 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 IRS1P35568 1242 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 PPM1AP35813 382 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 FXR1P51114 621 aaKnown RBP eCLIP8.92□□□□□ -0.98
MECP2-220ENST00000631210 ZNF132P52740 706 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 DSG1Q02413 1049 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 MYO1EQ12965 1108 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 FILIP1LQ4L180 1135 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 FIGNQ5HY92 759 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 VARS2Q5ST30 1063 aaKnown RBP8.92□□□□□ -0.98
MECP2-220ENST00000631210 SPOUT1Q5T280 376 aaKnown RBP8.92□□□□□ -0.98
MECP2-220ENST00000631210 FAM171A1Q5VUB5 890 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 SCARA5Q6ZMJ2 495 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.92□□□□□ -0.98
MECP2-220ENST00000631210 OR10T2Q8NGX3 314 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 PIK3R5Q8WYR1 880 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 SHC3Q92529 594 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 TIFAQ96CG3 184 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 SAMD11Q96NU1 681 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 TMEM209Q96SK2 561 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 LPIN3Q9BQK8 851 aa8.92□□□□□ -0.98
MECP2-220ENST00000631210 ELOVL4Q9GZR5 314 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms