RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
MATR3-227ENST00000618441 STRBPQ96SI9 672 aaKnown RBP12.9□□□□□ -0.34
MATR3-227ENST00000618441 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
MATR3-227ENST00000618441 CAAP1Q9H8G2 361 aa12.9□□□□□ -0.34
MATR3-227ENST00000618441 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
MATR3-227ENST00000618441 XAB2Q9HCS7 855 aaKnown RBP12.9□□□□□ -0.34
MATR3-227ENST00000618441 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
MATR3-227ENST00000618441 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
MATR3-227ENST00000618441 MYMKA6NI61 221 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 ZBTB11O95625 1053 aaPredicted RBP12.9□□□□□ -0.35
MATR3-227ENST00000618441 IRX4P78413 519 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 KCTD2Q14681 263 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 PRELID2Q8N945 189 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 C10orf82Q8WW14 230 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 NCSTNQ92542 709 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.35
MATR3-227ENST00000618441 FAIMQ9NVQ4 179 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.35
MATR3-227ENST00000618441 LOC100653049A0A140TA62 436 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 CLDN3O15551 220 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.355e-8■□□□□ 9.1
MATR3-227ENST00000618441 KRT34O76011 436 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 PHKA1P46020 1223 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 RASA2Q15283 850 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 PPP2R5EQ16537 467 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 TRMT10CQ7L0Y3 403 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 DTNAQ9Y4J8 743 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 ALG6Q9Y672 507 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 TTC4O95801 387 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 NR4A1P22736 598 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 NCKAP1LP55160 1127 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 SLC25A3Q00325 362 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 SLC45A4Q5BKX6 768 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 NEK10Q6ZWH5 1172 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 CACTIN-AS1Q8N1I8 211 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 RIN3Q8TB24 985 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 A0A1W2PQ67 120 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 H0YIN7 160 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 VILLO15195 856 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 KRT4P19013 534 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 TKTP29401 623 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 LCORLQ8N3X6 602 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 RBM15BQ8NDT2 890 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 SNX29Q8TEQ0 813 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 GPATCH1Q9BRR8 931 aaKnown RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 TSSK1BQ9BXA7 367 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
MATR3-227ENST00000618441 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
MATR3-227ENST00000618441 A0A1W2PPM1 405 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 EYA4O95677 639 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 KRT75O95678 551 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SRGAP2BP0DMP2 458 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 UCHL3P15374 230 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 DCAF12L1Q5VU92 463 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 THAP2Q9H0W7 228 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TACC3Q9Y6A5 838 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 LOC102724428A0A0B4J2F2 783 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 J3QRK9 145 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 KRT10P13645 584 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 CDH3P22223 829 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 NR2F2P24468 414 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SIK1P57059 783 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TBX4P57082 545 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 MCCD1P59942 119 aaPredicted RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SHKBP1Q8TBC3 707 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 HELQQ8TDG4 1101 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SNX27Q96L92 541 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 PANX3Q96QZ0 392 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 ACP6Q9NPH0 428 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 THEGQ9P2T0 379 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 FAM237BA0A1B0GVD1 139 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 MATN2O00339 956 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms