RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TMEM117Q9H0C3 514 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PORCNQ9H237 461 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 NFU1Q9UMS0 254 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 TRAF3IP3Q9Y228 551 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CFAP69A5D8W1 941 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 GYPCP04921 128 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 NCAM1P13591 858 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 MTF1Q14872 753 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 KLHL38Q2WGJ6 581 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ACAD10Q6JQN1 1059 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SRRM1Q8IYB3 904 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 CACNA2D3Q8IZS8 1091 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ATP6V0D2Q8N8Y2 350 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 MRPS31Q92665 395 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 PPP1R2P1Q96PQ5 205 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ZNF518BQ9C0D4 1074 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 TMEM134Q9H6X4 195 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 MOSPD1Q9UJG1 213 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 PACSIN2Q9UNF0 486 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 GRAP2O75791 330 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 CDR2Q01850 454 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 PRAMEF19Q5SWL8 479 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SYDE1Q6ZW31 735 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ACOT1Q86TX2 421 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ZC3H18Q86VM9 953 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 CHSY1Q86X52 802 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 C1orf131Q8NDD1 294 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SENP6Q9GZR1 1112 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 DNAJC17Q9NVM6 304 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.93□□□□□ -0.827e-7■■■■■ 41.8
CLTCL1-208ENST00000615606 GTF3C4Q9UKN8 822 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 TTC7AQ9ULT0 858 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 CSDE1O75534 798 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 AKAP3O75969 853 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ACSL3O95573 720 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 FLT3LGP49771 235 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 BTG3Q14201 252 aaPredicted RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 AMHR2Q16671 573 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 NOL9Q5SY16 702 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 GJB7Q6PEY0 223 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 MAP4K3Q8IVH8 894 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ATL2Q8NHH9 583 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SNF8Q96H20 258 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 DDX47Q9H0S4 455 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 RSAD1Q9HA92 442 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 TTI1O43156 1089 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 FBXO21O94952 628 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 HMGCRP04035 888 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 TAC1P20366 129 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ACO1P21399 889 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC12A3P55017 1021 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 PRAMEP78395 509 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 BRSK2Q8IWQ3 736 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 TC2NQ8N9U0 490 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 ARHGEF2Q92974 986 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 RMDN1Q96DB5 314 aa9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 RSRC1Q96IZ7 334 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 CNOT10Q9H9A5 744 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 METTL5Q9NRN9 209 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-208ENST00000615606 AFDNP55196 1824 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 PGK1P00558 417 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 SMIM10L2AP0DMW4 78 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 SMIM10L2BP0DMW5 78 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 IRF1P10914 325 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 SLCO1A2P46721 670 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 KLK7P49862 253 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 MYL6P60660 151 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 EVX2Q03828 476 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 DGKZQ13574 1117 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 FIGNQ5HY92 759 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 KCTD16Q68DU8 428 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 DDX53Q86TM3 631 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 TAS1R2Q8TE23 839 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 BLOC1S4Q9NUP1 217 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 INTS13Q9NVM9 706 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 TBK1Q9UHD2 729 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 MROH7Q68CQ1 1323 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 CASTOR2A6NHX0 329 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 PI4K2BG5E9Z4 385 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 FOXP2O15409 715 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 STX1BP61266 288 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 IKBKEQ14164 716 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 BOLA3Q53S33 107 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 RBM43Q6ZSC3 357 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 MSL3Q8N5Y2 521 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 C1orf54Q8WWF1 131 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 FBXO32Q969P5 355 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 FOXN3O00409 490 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 F9P00740 461 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC11A2P49281 568 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 EPC2Q52LR7 807 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 SH3BP5LQ7L8J4 393 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 MUC3BQ9H195 1237 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 TRPM5Q9NZQ8 1165 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms