RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PTPRDP23468 1912 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 ATG2AQ2TAZ0 1938 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 PLXNA4Q9HCM2 1894 aa8.64□□□□□ -1.03
PCDH9-205ENST00000614931 MYH10P35580 1976 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 CASTOR2A6NHX0 329 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 LRRC53A6NM62 1247 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 PIRO00625 290 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 SPTLC1O15269 473 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 DDHD2O94830 711 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 CALCAP01258 141 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 THP07101 528 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 KRT19P08727 400 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 TRIM21P19474 475 aaKnown RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 LRPAP1P30533 357 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 KRT9P35527 623 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 ASPAP45381 313 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 DSC1Q08554 894 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 GRIK3Q13003 919 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 CAMK1Q14012 370 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 TRIM14Q14142 442 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF699Q32M78 642 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 LEXMQ3ZCV2 418 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 PAN2Q504Q3 1202 aaKnown RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 TCEAL5Q5H9L2 206 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 NOMO2Q5JPE7 1267 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 WDR59Q6PJI9 974 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 SCARA5Q6ZMJ2 495 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF280BQ86YH2 543 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 BEST2Q8NFU1 509 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 OLIG1Q8TAK6 271 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 CACTINQ8WUQ7 758 aaKnown RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 NT5C1BQ96P26 610 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 UHRF1Q96T88 793 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 NUP58Q9BVL2 599 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 NSUN3Q9H649 340 aaKnown RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 UBE2ZQ9H832 354 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 UBE2TQ9NPD8 197 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 TBC1D13Q9NVG8 400 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 IMPACTQ9P2X3 320 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
PCDH9-205ENST00000614931 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
PCDH9-205ENST00000614931 TCF20Q9UGU0 1960 aaKnown RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 AKR1B15C9JRZ8 316 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 PODXLO00592 558 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ZC3H11AO75152 810 aaKnown RBP eCLIP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ITGB1P05556 798 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 CYP3A5P20815 502 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ACO1P21399 889 aaKnown RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 FECHP22830 423 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 DNAJB1P25685 340 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 CLCNKBP51801 687 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 RBP5P82980 135 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ZBED6P86452 979 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 CCZ1BP86790 482 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 CCZ1P86791 482 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 CETN1Q12798 172 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 TUSC3Q13454 348 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 TRPC3Q13507 836 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 RAPGEF1Q13905 1077 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 DRAP1Q14919 205 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ARHGAP44Q17R89 818 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 PPFIBP1Q86W92 1011 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 COLGALT2Q8IYK4 626 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 PPM1KQ8N3J5 372 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 SPPL3Q8TCT6 385 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 SHC3Q92529 594 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 PABPC5Q96DU9 382 aaKnown RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 HPDLQ96IR7 371 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 NECAB3Q96P71 396 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 TSPAN18Q96SJ8 248 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 DNAJC7Q99615 494 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 EDEM3Q9BZQ6 932 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 SMYD3Q9H7B4 428 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 NRDE2Q9H7Z3 1164 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ALG13Q9NP73 1137 aaKnown RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 UBN1Q9NPG3 1134 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 ABHD10Q9NUJ1 306 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 DNAJB4Q9UDY4 337 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
PCDH9-205ENST00000614931 NME7Q9Y5B8 376 aa8.62□□□□□ -1.03
PCDH9-205ENST00000614931 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 F8VZ95 297 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 FOXN3O00409 490 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 HOXA2O43364 376 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 XPOTO43592 962 aaKnown RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 NCK2O43639 380 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 PLEKP08567 350 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 KCNA5P22460 613 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 ATICP31939 592 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CDH8P55286 799 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 GCNT1Q02742 428 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms