RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RNF43Q68DV7 783 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 PSAPL1Q6NUJ1 521 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 MPZL3Q6UWV2 235 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 USP37Q86T82 979 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 LSM14BQ9BX40 385 aaKnown RBP18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 OXCT2Q9BYC2 517 aaPredicted RBP18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 DNAJC25Q9H1X3 360 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 SMOC1Q9H4F8 434 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 SH2B1Q9NRF2 756 aaPredicted RBP18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 ANKFY1Q9P2R3 1169 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 TUBGCP4Q9UGJ1 667 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 SLC8A2Q9UPR5 921 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 PCDHGA5Q9Y5G8 931 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 OBSL1O75147 1896 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 MYO16Q9Y6X6 1858 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 FGF19O95750 216 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 GABRR2P28476 465 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 NPTX2P47972 431 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 TNK2Q07912 1038 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 NECAB1Q8N987 351 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 BPIFB1Q8TDL5 484 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 CRISPLD1Q9H336 500 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 TMEM134Q9H6X4 195 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 KMT5AQ9NQR1 393 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 OBP2AQ9NY56 170 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 TIMM13Q9Y5L4 95 aaPredicted RBP18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 KIAA1549LQ6ZVL6 1849 aa18.76■□□□□ 0.59
CSNK1E-215ENST00000612795 ATRXP46100 2492 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 CCDC163A0A0D9SF12 145 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 VNN2O95498 520 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 COL9A2Q14055 689 aaPredicted RBP18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 PTPAQ15257 358 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 ITPRIPL2Q3MIP1 535 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 PLA2G2CQ5R387 149 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 PKN3Q6P5Z2 889 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 UNQ6494/PRO21346Q6UXR6 183 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 ITIH5Q86UX2 942 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 LRRC3BQ96PB8 259 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 GCNAQ96QF7 691 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 VPS45Q9NRW7 570 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 ASB3Q9Y575 518 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 FRYQ5TBA9 3013 aa18.75■□□□□ 0.59
CSNK1E-215ENST00000612795 OR6C75A6NL08 312 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 M0QZQ0 153 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 ATG13O75143 517 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 AKAP3O75969 853 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 OAZ2O95190 189 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 PRAMEF12O95522 483 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 PROZP22891 400 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 MCM2P49736 904 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 NOVA1P51513 510 aaKnown RBP18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 GPR17Q13304 367 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 SAFBQ15424 915 aaKnown RBP eCLIP18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 GAREM2Q75VX8 874 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 TAS1R3Q7RTX0 852 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 PSMG2Q969U7 264 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 DRC1Q96MC2 740 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 TMEM209Q96SK2 561 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 EDEM2Q9BV94 578 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 THG1LQ9NWX6 298 aaKnown RBP18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 ARHGAP28Q9P2N2 729 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 SLC27A5Q9Y2P5 690 aa18.74■□□□□ 0.59
CSNK1E-215ENST00000612795 MTMR11A4FU01 709 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 C1QTNF9BB2RNN3 333 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 ABLIM1O14639 778 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 MEFVO15553 781 aaPredicted RBP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 HIP1RO75146 1068 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 C1QTNF9P0C862 333 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 CYP4F8P98187 520 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 GRSF1Q12849 480 aaKnown RBP eCLIP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 STRN3Q13033 797 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 ZNF174Q15697 407 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 ECM1Q16610 540 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 SEZ6Q53EL9 994 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 DNAJB7Q7Z6W7 309 aaPredicted RBP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 NSUN7Q8NE18 718 aaKnown RBP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 DDX19AQ9NUU7 478 aaKnown RBP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 ZMIZ1Q9ULJ6 1067 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 THADAQ6YHU6 1953 aa18.73■□□□□ 0.59
CSNK1E-215ENST00000612795 SOAT2O75908 522 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 CXCL8P10145 99 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 MATR3P43243 847 aaKnown RBP eCLIP18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 SPAG1Q07617 926 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 FOXC1Q12948 553 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 ORC2Q13416 577 aaPredicted RBP18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 VEPH1Q14D04 833 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 ELF2Q15723 593 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 OVOS1Q6IE37 1185 aa18.72■□□□□ 0.59
CSNK1E-215ENST00000612795 CENPPQ6IPU0 288 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms