RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 SMIM28A0A1B0GU29 152 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 ARL5CA6NH57 179 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 H2AFZP0C0S5 128 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 H2AFVQ71UI9 128 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 ARHGEF19Q8IW93 802 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 RPUSD2Q8IZ73 545 aaKnown RBP23.81■■□□□ 1.4
UBE3C-209ENST00000611269 TMEM130Q8N3G9 435 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 TAS1R2Q8TE23 839 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 DPF3Q92784 378 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 ANKRD36BP1Q96IX9 119 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 TLR10Q9BXR5 811 aa23.81■■□□□ 1.4
UBE3C-209ENST00000611269 A0A0A6YYK5 440 aaPredicted RBP23.8■■□□□ 1.4
UBE3C-209ENST00000611269 TUBBP07437 444 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 KCNE1P15382 129 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 AFF1P51825 1210 aaKnown RBP23.8■■□□□ 1.4
UBE3C-209ENST00000611269 IFI16Q16666 785 aaKnown RBP23.8■■□□□ 1.4
UBE3C-209ENST00000611269 ZNF572Q7Z3I7 529 aaPredicted RBP23.8■■□□□ 1.4
UBE3C-209ENST00000611269 CREG2Q8IUH2 290 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 GSTCDQ8NEC7 633 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 LNX1Q8TBB1 728 aaPredicted RBP23.8■■□□□ 1.4
UBE3C-209ENST00000611269 OSBPL9Q96SU4 736 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 ZNF446Q9NWS9 450 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 DERAQ9Y315 318 aa23.8■■□□□ 1.4
UBE3C-209ENST00000611269 PTGESO14684 152 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 LRRN2O75325 713 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 PALMO75781 387 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 TNNC2P02585 160 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 PFKMP08237 780 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 SCARA3Q6AZY7 606 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 NT5DC4Q86YG4 428 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 FBXL13Q8NEE6 735 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 IL23AQ9NPF7 189 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 UBN1Q9NPG3 1134 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 TMEM161AQ9NX61 479 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 RAB21Q9UL25 225 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 ZMYND8Q9ULU4 1186 aaPredicted RBP23.79■■□□□ 1.4
UBE3C-209ENST00000611269 ZNF185O15231 689 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 ITIH3Q06033 890 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 ZBTB6Q15916 424 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 TMCO3Q6UWJ1 677 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.79■■□□□ 1.42e-11■■■■■ 48.1
UBE3C-209ENST00000611269 SEMA4DQ92854 862 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 C18orf25Q96B23 403 aaPredicted RBP23.79■■□□□ 1.4
UBE3C-209ENST00000611269 CAPZA3Q96KX2 299 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 RPS6KC1Q96S38 1066 aa23.79■■□□□ 1.4
UBE3C-209ENST00000611269 ELAC1Q9H777 363 aaKnown RBP23.79■■□□□ 1.4
UBE3C-209ENST00000611269 PHACTR2O75167 634 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 VNN1O95497 513 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 GUCY2FP51841 1108 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 FPGSQ05932 587 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.44e-8■■■□□ 16.4
UBE3C-209ENST00000611269 BRD3Q15059 726 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 C1orf127Q8N9H9 656 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 NOA1Q8NC60 698 aaKnown RBP23.78■■□□□ 1.4
UBE3C-209ENST00000611269 MIOSQ9NXC5 875 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 TUBGCP4Q9UGJ1 667 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 PCDHB7Q9Y5E2 793 aa23.78■■□□□ 1.4
UBE3C-209ENST00000611269 ABHD14A-ACY1A0A1B0GW23 586 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 HLA-DRAP01903 254 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 FGFR1P11362 822 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 TNFAIP3P21580 790 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 PIK3CAP42336 1068 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 SCNN1GP51170 649 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 MFAP3P55082 362 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 CLLU1OSQ5K130 101 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 MEI1Q5TIA1 1274 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 C16orf59Q7L2K0 433 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 GLYCTKQ8IVS8 523 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.77■■□□□ 1.43e-7■■■■■ 58.1
UBE3C-209ENST00000611269 RAB20Q9NX57 234 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 DPP3Q9NY33 737 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 INPP5FQ9Y2H2 1132 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 TDRD15B5MCY1 1934 aaKnown RBP23.77■■□□□ 1.4
UBE3C-209ENST00000611269 GRID2IPA4D2P6 1211 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 CCDC151A5D8V7 595 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 PDE2AO00408 941 aaPredicted RBP23.77■■□□□ 1.4
UBE3C-209ENST00000611269 ZRANB2O95218 330 aaKnown RBP eCLIP23.77■■□□□ 1.4
UBE3C-209ENST00000611269 CRIPAKQ8N1N5 446 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 HELQQ8TDG4 1101 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 COG1Q8WTW3 980 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 PPP1R10Q96QC0 940 aaKnown RBP23.77■■□□□ 1.4
UBE3C-209ENST00000611269 TSPAN18Q96SJ8 248 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 AGPAT1Q99943 283 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 RNF14Q9UBS8 474 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 LRFN2Q9ULH4 789 aa23.77■■□□□ 1.4
UBE3C-209ENST00000611269 UBQLN1Q9UMX0 589 aaKnown RBP23.77■■□□□ 1.4
UBE3C-209ENST00000611269 CST3P01034 146 aaPredicted RBP23.76■■□□□ 1.39
UBE3C-209ENST00000611269 NCOA4Q13772 614 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 GLB1LQ6UWU2 654 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 FAM71AQ8IYT1 594 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 ELMO3Q96BJ8 720 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 PI4K2AQ9BTU6 479 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 OGFRQ9NZT2 677 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 SIX4Q9UIU6 781 aa23.76■■□□□ 1.39
UBE3C-209ENST00000611269 ATP8B1O43520 1251 aa23.75■■□□□ 1.39
UBE3C-209ENST00000611269 NCK2O43639 380 aa23.75■■□□□ 1.39
UBE3C-209ENST00000611269 ZC3H11AO75152 810 aaKnown RBP eCLIP23.75■■□□□ 1.39
UBE3C-209ENST00000611269 POMCP01189 267 aa23.75■■□□□ 1.39
UBE3C-209ENST00000611269 ITGB3P05106 788 aa23.75■■□□□ 1.39
UBE3C-209ENST00000611269 THP07101 528 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms