RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 FBXW11Q9UKB1 542 aa15.32■□□□□ 0.04
TUBE1-211ENST00000605457 ARHGEF37A1IGU5 675 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 IL9P15248 144 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
TUBE1-211ENST00000605457 ROR1Q01973 937 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 OVOS1Q6IE37 1185 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 INTS8Q75QN2 995 aaKnown RBP15.31■□□□□ 0.04
TUBE1-211ENST00000605457 USP37Q86T82 979 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 HDAC7Q8WUI4 952 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 MKNK1Q9BUB5 465 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 PLEKHA4Q9H4M7 779 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 SFXN1Q9H9B4 322 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 TRIOO75962 3097 aa15.31■□□□□ 0.04
TUBE1-211ENST00000605457 WDR27A2RRH5 827 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 CYB561D2O14569 222 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 CETN3O15182 167 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 SPATA31D3P0C874 917 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 VAMP7P51809 220 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 AP3M2P53677 418 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 MCCD1P59942 119 aaPredicted RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 BFSP1Q12934 665 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 SMAD2Q15796 467 aaKnown RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 TDRD10Q5VZ19 366 aaKnown RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 SPATA31D4Q6ZUB0 917 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 C12orf76Q8N812 135 aaPredicted RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 KREMEN2Q8NCW0 462 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 SUSD6Q92537 303 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 HPDLQ96IR7 371 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 DPP7Q9UHL4 492 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 DSEQ9UL01 958 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 USP15Q9Y4E8 981 aaPredicted RBP15.3■□□□□ 0.04
TUBE1-211ENST00000605457 NOTCH4Q99466 2003 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 PTPRDP23468 1912 aa15.3■□□□□ 0.04
TUBE1-211ENST00000605457 IKBKBO14920 756 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 CST3P01034 146 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-211ENST00000605457 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
TUBE1-211ENST00000605457 ITIH3Q06033 890 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 ENPEPQ07075 957 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 MYO1EQ12965 1108 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 RARS2Q5T160 578 aaKnown RBP15.29■□□□□ 0.04
TUBE1-211ENST00000605457 ELMSAN1Q6PJG2 1045 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 OXCT2Q9BYC2 517 aaPredicted RBP15.29■□□□□ 0.04
TUBE1-211ENST00000605457 ADAM7Q9H2U9 754 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
TUBE1-211ENST00000605457 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
TUBE1-211ENST00000605457 BICDL2A1A5D9 508 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 ABLIM3O94929 683 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 PAPLNO95428 1278 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 MBD3O95983 291 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 TRIM49P0CI25 452 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 TRIM49CP0CI26 452 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 KRT13P13646 458 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 PAK1Q13153 545 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 BIRC3Q13489 604 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 ZACNQ401N2 412 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 ZNF461Q8TAF7 563 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 DUSP9Q99956 384 aaKnown RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 CDH22Q9UJ99 828 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 SNX9Q9Y5X1 595 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 OR6C75A6NL08 312 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 RFPL2O75678 378 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 STAU1O95793 577 aaKnown RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-211ENST00000605457 CES5AQ6NT32 575 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 TMC5Q6UXY8 1006 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 OR10T2Q8NGX3 314 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 ADAMTS19Q8TE59 1207 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 RTP3Q9BQQ7 232 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 ZDHHC7Q9NXF8 308 aa15.28■□□□□ 0.04
TUBE1-211ENST00000605457 HUS1O60921 280 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 PHACTR2O75167 634 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 ZMYND10O75800 440 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 VNN1O95497 513 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 OR4Q2P0C623 313 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 CPB1P15086 417 aa15.27■□□□□ 0.03
TUBE1-211ENST00000605457 ATF2P15336 505 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms