RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 DDX28Q9NUL7 540 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 ZSCAN32Q9NX65 697 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 MAP3K5Q99683 1374 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 LPXNO60711 386 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 OATP04181 439 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 UGP2Q16851 508 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NOP9Q86U38 636 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 ANKRD13CQ8N6S4 541 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 DNAJB8Q8NHS0 232 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NRKQ7Z2Y5 1582 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 PDHA1P08559 390 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RCAN1P53805 252 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 NR5A1Q13285 461 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 SF3B3Q15393 1217 aaKnown RBP3.55□□□□□ -1.84
NEB-218ENST00000603639 SWI5Q1ZZU3 235 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 RHOT1Q8IXI2 618 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 MKNK1Q9BUB5 465 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ANKHQ9HCJ1 492 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 KCNK4Q9NYG8 393 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 ENOPH1Q9UHY7 261 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 TRPM1Q7Z4N2 1603 aa3.55□□□□□ -1.84
NEB-218ENST00000603639 FDX1P10109 184 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 DAB2P98082 770 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TP53BP2Q13625 1128 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZBTB41Q5SVQ8 909 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TMEM35BQ8NCS4 154 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 CDCA5Q96FF9 252 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 KCNC2Q96PR1 638 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 FGGP02679 453 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 NR2C2P49116 596 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ACTR3P61158 418 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TMEM192Q8IY95 271 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 KRT84Q9NSB2 600 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 PITPNM2Q9BZ72 1349 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ENC1O14682 589 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 OR52Z1P0C646 297 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 TMPRSS15P98073 1019 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TRAF3Q13114 568 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 HEATR4Q86WZ0 1026 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 GALNT4Q8N4A0 578 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TOR4AQ9NXH8 423 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 STK39Q9UEW8 545 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 FAM86C2PA6NEL3 165 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 DNAJC6O75061 913 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 THRBP10828 461 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 STAT3P40763 770 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 IL1RL1Q01638 556 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 RESTQ13127 1097 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZMYM1Q5SVZ6 1142 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ERMARDQ5T6L9 678 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 CASP10Q92851 521 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 RHOBTB2Q9BYZ6 727 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 HPS4Q9NQG7 708 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ARHGEF3Q9NR81 526 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 WDR35Q9P2L0 1181 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 PCDHA4Q9UN74 947 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 LRCH1Q9Y2L9 728 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ALG5Q9Y673 324 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 SOX30O94993 753 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ST3GAL1Q11201 340 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 RSRC2Q7L4I2 434 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 SVOPQ8N4V2 548 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ADNPQ9H2P0 1102 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZNF229Q9UJW7 825 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 PLAGL2Q9UPG8 496 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 SULT1B1O43704 296 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 EIF2B5Q13144 721 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 MTHFSDQ2M296 383 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 APOA5Q6Q788 366 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 GPN1Q9HCN4 374 aaPredicted RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 HPCAL4Q9UM19 191 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ALBP02768 609 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TSHRP16473 764 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZNF18P17022 549 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 IFNAR1P17181 557 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ATP2B4P23634 1241 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 SLC10A5Q5PT55 438 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 KRT40Q6A162 431 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TMC5Q6UXY8 1006 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZSCAN10Q96SZ4 725 aaPredicted RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 DNAJC7Q99615 494 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 CXorf21Q9HAI6 301 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 RC3H2Q9HBD1 1191 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 UGT2A1Q9Y4X1 527 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 POLR3AO14802 1390 aaPredicted RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 CASZ1Q86V15 1759 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 NOTOA8MTQ0 251 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 CAND2O75155 1236 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 H6PDO95479 791 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 S100A6P06703 90 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TALDO1P37837 337 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 EGFLAMQ63HQ2 1017 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 ZNF438Q7Z4V0 828 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 FBXL16Q8N461 479 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 TSR2Q969E8 191 aaKnown RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 IFT80Q9P2H3 777 aaPredicted RBP3.54□□□□□ -1.84
NEB-218ENST00000603639 PCDHA3Q9Y5H8 950 aa3.54□□□□□ -1.84
NEB-218ENST00000603639 KLHL33A6NCF5 533 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms