RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 C15orf39Q6ZRI6 1047 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 GPR149Q86SP6 731 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 ZC3H3Q8IXZ2 948 aaKnown RBP19.66■□□□□ 0.74
ZNF558-204ENST00000596172 C12orf76Q8N812 135 aaPredicted RBP19.66■□□□□ 0.74
ZNF558-204ENST00000596172 ZNF516Q92618 1163 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 FAM84AQ96KN4 292 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 NECTIN4Q96NY8 510 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 TSG101Q99816 390 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 MKNK1Q9BUB5 465 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 ZDHHC7Q9NXF8 308 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 TIMM13Q9Y5L4 95 aaPredicted RBP19.66■□□□□ 0.74
ZNF558-204ENST00000596172 VWA8A3KMH1 1905 aa19.66■□□□□ 0.74
ZNF558-204ENST00000596172 PSMA7O14818 248 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 CETN3O15182 167 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 KRT19P08727 400 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 SPATA31D3P0C874 917 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 CCNE1P24864 410 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 MTHFRP42898 656 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 FKBP3Q00688 224 aaKnown RBP19.65■□□□□ 0.74
ZNF558-204ENST00000596172 ROR1Q01973 937 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 MYO1EQ12965 1108 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 CAMK4Q16566 473 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 ATAT1Q5SQI0 421 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 RARS2Q5T160 578 aaKnown RBP19.65■□□□□ 0.74
ZNF558-204ENST00000596172 ANKRD40Q6AI12 368 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 SCARA3Q6AZY7 606 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 SPATA31D4Q6ZUB0 917 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
ZNF558-204ENST00000596172 METTL23Q86XA0 190 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 SPATA18Q8TC71 538 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 HPDLQ96IR7 371 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 RIPOR3Q96MK2 946 aa19.65■□□□□ 0.74
ZNF558-204ENST00000596172 LRRIQ3A6PVS8 624 aaPredicted RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 PPP1R3GB7ZBB8 358 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 ZMYND10O75800 440 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 CST3P01034 146 aaPredicted RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 ATF2P15336 505 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 CD44P16070 742 aaKnown RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 HOXA9P31269 272 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 CBX2Q14781 532 aaPredicted RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 ISM2Q6H9L7 571 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 DPH6Q7L8W6 267 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 LIMS2Q7Z4I7 341 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 ADHFE1Q8IWW8 467 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 FAM186BQ8IYM0 893 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 UHRF1Q96T88 793 aaPredicted RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 APOL5Q9BWW9 433 aa19.64■□□□□ 0.73
ZNF558-204ENST00000596172 COL25A1Q9BXS0 654 aaPredicted RBP19.64■□□□□ 0.73
ZNF558-204ENST00000596172 CCDC195A0A1B0GUA6 201 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 WDR27A2RRH5 827 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 HUS1O60921 280 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
ZNF558-204ENST00000596172 POU2F2P09086 479 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 HNRNPA1P09651 372 aaKnown RBP eCLIP19.63■□□□□ 0.73
ZNF558-204ENST00000596172 FAM163BP0C2L3 166 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 ATICP31939 592 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 VAMP7P51809 220 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 PMS1P54277 932 aaKnown RBP19.63■□□□□ 0.73
ZNF558-204ENST00000596172 BFSP1Q12934 665 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 LIN9Q5TKA1 542 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 WSCD1Q658N2 575 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 TMC5Q6UXY8 1006 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 CCDC149Q6ZUS6 474 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 TMEM86AQ8N2M4 240 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 TOP6BLQ8N6T0 577 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 PHF7Q9BWX1 381 aaPredicted RBP19.63■□□□□ 0.73
ZNF558-204ENST00000596172 PRKD2Q9BZL6 878 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 AFF4Q9UHB7 1163 aaKnown RBP19.63■□□□□ 0.73
ZNF558-204ENST00000596172 TTC28Q96AY4 2481 aa19.63■□□□□ 0.73
ZNF558-204ENST00000596172 C19orf67A6NJJ6 358 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 BIN1O00499 593 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 SLC16A3O15427 465 aaKnown RBP19.62■□□□□ 0.73
ZNF558-204ENST00000596172 KRT13P13646 458 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 DLG4P78352 724 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 ZP2Q05996 745 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 GPR17Q13304 367 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 ZACNQ401N2 412 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 C1orf220Q5T0J3 134 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 TCEAL8Q8IYN2 117 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 THEM5Q8N1Q8 247 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 ZNF707Q96C28 371 aaPredicted RBP19.62■□□□□ 0.73
ZNF558-204ENST00000596172 VRTNQ9H8Y1 702 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 SNX9Q9Y5X1 595 aa19.62■□□□□ 0.73
ZNF558-204ENST00000596172 SCN1AP35498 2009 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 BICDL2A1A5D9 508 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 RFPL2O75678 378 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 C8AP07357 584 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 EPB41P11171 864 aaKnown RBP19.61■□□□□ 0.73
ZNF558-204ENST00000596172 ELF1P32519 619 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 GTF2H1P32780 548 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 ARPP19P56211 112 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 TRPC3Q13507 836 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 TDRD10Q5VZ19 366 aaKnown RBP19.61■□□□□ 0.73
ZNF558-204ENST00000596172 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
ZNF558-204ENST00000596172 CEP63Q96MT8 703 aa19.61■□□□□ 0.73
ZNF558-204ENST00000596172 RTP3Q9BQQ7 232 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms