RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 BAG4O95429 457 aaKnown RBP15.06■□□□□ 0
SHKBP1-208ENST00000595726 CTDNEP1O95476 244 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 PRAMEF12O95522 483 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 OR4Q2P0C623 313 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 CPB1P15086 417 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 ATP2B1P20020 1258 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 CSRP1P21291 193 aaKnown RBP15.06■□□□□ 0
SHKBP1-208ENST00000595726 NEK4P51957 841 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 ELF2Q15723 593 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 ME3Q16798 604 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 GALNT17Q6IS24 598 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 GAREM2Q75VX8 874 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
SHKBP1-208ENST00000595726 C18orf25Q96B23 403 aaPredicted RBP15.06■□□□□ 0
SHKBP1-208ENST00000595726 CHFRQ96EP1 664 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 SMG9Q9H0W8 520 aaKnown RBP15.06■□□□□ 0
SHKBP1-208ENST00000595726 TMEM9BQ9NQ34 198 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 PCDHA12Q9UN75 941 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 NUB1Q9Y5A7 615 aa15.06■□□□□ 0
SHKBP1-208ENST00000595726 OTOL1A6NHN0 477 aaPredicted RBP15.05■□□□□ -0
SHKBP1-208ENST00000595726 RNF40O75150 1001 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 RHOBTB1O94844 696 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 EGFP01133 1207 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 IRX4P78413 519 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 DUSP4Q13115 394 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 ITPRIPL2Q3MIP1 535 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 DCAF4L1Q3SXM0 396 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 TMEM196Q5HYL7 178 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 GPR158Q5T848 1215 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 NAIF1Q69YI7 327 aaPredicted RBP15.05■□□□□ -0
SHKBP1-208ENST00000595726 ALKAL1Q6UXT8 129 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 SLFN12Q8IYM2 578 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 GTF3C6Q969F1 213 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 KIF12Q96FN5 646 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 C2orf40Q9H1Z8 148 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 ATXN3LQ9H3M9 355 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 GKN1Q9NS71 199 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 SLC27A5Q9Y2P5 690 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 TIMM13Q9Y5L4 95 aaPredicted RBP15.05■□□□□ -0
SHKBP1-208ENST00000595726 TRIP11Q15643 1979 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 CACNA1EQ15878 2313 aa15.05■□□□□ -0
SHKBP1-208ENST00000595726 KHNYNO15037 678 aaKnown RBP15.04■□□□□ -0
SHKBP1-208ENST00000595726 ATG13O75143 517 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 SOAT2O75908 522 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 U2AF2P26368 475 aaKnown RBP eCLIP15.04■□□□□ -0
SHKBP1-208ENST00000595726 GBP1P32455 592 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 CDR1P51861 262 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 ATF7IP2Q5U623 682 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 CAMKK1Q8N5S9 505 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 NECAB1Q8N987 351 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 DEPTORQ8TB45 409 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 BPIFB1Q8TDL5 484 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 DDX12PQ92771 950 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 SUSD3Q96L08 255 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 TBC1D32Q96NH3 1257 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 NEUROG3Q9Y4Z2 214 aa15.04■□□□□ -0
SHKBP1-208ENST00000595726 KIF26AQ9ULI4 1882 aaPredicted RBP15.03■□□□□ -0
SHKBP1-208ENST00000595726 SPAARA0A1B0GVQ0 90 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 MEFVO15553 781 aaPredicted RBP15.03■□□□□ -0
SHKBP1-208ENST00000595726 GABRR2P28476 465 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 TXKP42681 527 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 EPHB3P54753 998 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 CYP4F8P98187 520 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 GRSF1Q12849 480 aaKnown RBP eCLIP15.03■□□□□ -0
SHKBP1-208ENST00000595726 XKR4Q5GH76 650 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 TRIM68Q6AZZ1 485 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 ZNF280DQ6N043 979 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 DNAJB7Q7Z6W7 309 aaPredicted RBP15.03■□□□□ -0
SHKBP1-208ENST00000595726 ABCA7Q8IZY2 2146 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 TTC9BQ8N6N2 239 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 MCPH1Q8NEM0 835 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 KIF2CQ99661 725 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 TTC12Q9H892 705 aaPredicted RBP15.03■□□□□ -0
SHKBP1-208ENST00000595726 MSRB2Q9Y3D2 182 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 KALRNO60229 2985 aa15.03■□□□□ -0
SHKBP1-208ENST00000595726 SPATA31C1P0DKV0 1188 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 XRCC6P12956 609 aaKnown RBP eCLIP15.02■□□□□ -0
SHKBP1-208ENST00000595726 MCM4P33991 863 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 GALK1P51570 392 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 YARSP54577 528 aaKnown RBP15.02■□□□□ -0
SHKBP1-208ENST00000595726 ST3GAL1Q11201 340 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 NSUN7Q8NE18 718 aaKnown RBP15.02■□□□□ -0
SHKBP1-208ENST00000595726 BEST2Q8NFU1 509 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 POLR3CQ9BUI4 534 aaPredicted RBP15.02■□□□□ -0
SHKBP1-208ENST00000595726 CDT1Q9H211 546 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 EBF3Q9H4W6 596 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 HPS4Q9NQG7 708 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 ORC3Q9UBD5 711 aaPredicted RBP15.02■□□□□ -0
SHKBP1-208ENST00000595726 MAFFQ9ULX9 164 aa15.02■□□□□ -0
SHKBP1-208ENST00000595726 ASCC3Q8N3C0 2202 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 MAST4O15021 2626 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 TRDMT1O14717 391 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 CAPNS1P04632 268 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 FDPSP14324 419 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 GRM5P41594 1212 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 NAMPTP43490 491 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 ALDH1A3P47895 512 aa15.01□□□□□ -0.01
SHKBP1-208ENST00000595726 DGKEP52429 567 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms