RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 SDCBP2Q9H190 292 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 CISHQ9NSE2 258 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 NENFQ9UMX5 172 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 COL4A6Q14031 1691 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 A0A087X0T9 212 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 USP27XA6NNY8 438 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 AKR1B10O60218 316 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 WEE2P0C1S8 567 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 FAM228BP0C875 321 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 CYP11B1P15538 503 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 RAG1P15918 1043 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 PDE6CP51160 858 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 BPIFB4P59827 614 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 KRT83P78385 493 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 INCA1Q0VD86 236 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 TUSC3Q13454 348 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 SV2CQ496J9 727 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 NOP9Q86U38 636 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 VPS36Q86VN1 386 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 TTC39CQ8N584 583 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 URGCPQ8TCY9 931 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 SLC20A1Q8WUM9 679 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 RSPH1Q8WYR4 309 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 DDX1Q92499 740 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 PPP1R13BQ96KQ4 1090 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 UROC1Q96N76 676 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 AGPAT1Q99943 283 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 PRDM5Q9NQX1 630 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 MTMR10Q9NXD2 777 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 PTPRSQ13332 1948 aa12.33□□□□□ -0.44
CACNA1A-213ENST00000593267 CUL9Q8IWT3 2517 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 EYSQ5T1H1 3165 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 PODXLO00592 558 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 SPTLC1O15269 473 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 HOXA2O43364 376 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 CILPO75339 1184 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 IPO7O95373 1038 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 POMCP01189 267 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 PFKMP08237 780 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 FGFR1P11362 822 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 CD58P19256 250 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 IBSPP21815 317 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 CLCNKBP51801 687 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 LILRA4P59901 499 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 CDR2Q01850 454 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 GFPT1Q06210 699 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 DSC1Q08554 894 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 IKBKEQ14164 716 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 SPA17Q15506 151 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 UPP1Q16831 310 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 ZNF677Q86XU0 584 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 TMEM199Q8N511 208 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 WHAMMQ8TF30 809 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 DDX27Q96GQ7 796 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 CASD1Q96PB1 797 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 LRFN2Q9ULH4 789 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
CACNA1A-213ENST00000593267 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 TACC1O75410 805 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 PAEPP09466 180 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 CSF2RAP15509 400 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 CHRNB2P17787 502 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 PAX3P23760 479 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 VAV2P52735 878 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 CDH8P55286 799 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 FMO1Q01740 532 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
CACNA1A-213ENST00000593267 SOWAHAQ2M3V2 549 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms