RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 CDC23Q9UJX2 597 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 RPS6KA6Q9UK32 745 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 CPSF3Q9UKF6 684 aaKnown RBP1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 RCOR1Q9UKL0 485 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 CORO1CQ9ULV4 474 aaPredicted RBP1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 PPT2Q9UMR5 302 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 ARHGAP26Q9UNA1 814 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 STX8Q9UNK0 236 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 AURKCQ9UQB9 309 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 ANKRD6Q9Y2G4 727 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 DTNAQ9Y4J8 743 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 TELO2Q9Y4R8 837 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 PCDHB6Q9Y5E3 794 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 PCDHGA2Q9Y5H1 932 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 TRPV2Q9Y5S1 764 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 STON1Q9Y6Q2 735 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 COMMD3-BMI1R4GMX3 469 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 PRDM2Q13029 1718 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 SH3TC1Q8TE82 1336 aa1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 ZNF335Q9H4Z2 1342 aaPredicted RBP1.85□□□□□ -2.11
NEDD4L-212ENST00000585594 RSF1Q96T23 1441 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 NCOA3Q9Y6Q9 1424 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 DNAJC25-GNG10A0A024R161 153 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 A0A087X0M5 115 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GOLGA8QA0A0J9YX86 632 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 KRTAP9-6A0A140TA67 174 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 A0A1B0GX30 115 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PMS2P1A4D2B8 440 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GOLGA8OA6NCC3 632 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 DCDC2CA8MYV0 355 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 KIF28PB7ZC32 967 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TISP43B9A030 160 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 B9A039 149 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 E7EVH7 732 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GOLGA8NF8WBI6 632 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 IGF2BP3O00425 579 aaKnown RBP eCLIP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PSMA7O14818 248 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 FSCN2O14926 492 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 NPC1O15118 1278 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 AXIN1O15169 862 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TP73O15350 636 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 MEFVO15553 781 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 HNRNPRO43390 633 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PROM1O43490 865 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 SLC25A17O43808 307 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ADCY3O60266 1144 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GREM1O60565 184 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PTCD1O75127 700 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 SMIM24O75264 130 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ZPR1O75312 459 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 SURF6O75683 361 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TOMM70O94826 608 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 LCA5LO95447 670 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 F13A1P00488 732 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 LRG1P02750 347 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 LTFP02788 710 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 HMGN1P05114 100 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 URODP06132 367 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GLAP06280 429 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ASNSP08243 561 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 CLTAP09496 248 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PABPC4LP0CB38 370 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 SRGAP2CP0DJJ0 459 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GNAT1P11488 350 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ALADP13716 330 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 RAG1P15918 1043 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 NAGAP17050 411 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ATF6P18850 670 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 CASTP20810 708 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GALP22466 123 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TBXAS1P24557 533 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TKTP29401 623 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 LRPAP1P30533 357 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 HOXA6P31267 233 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TLX1P31314 330 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 MC4RP32245 332 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GBP1P32455 592 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 CIITAP33076 1130 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 GUCY1A2P33402 732 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 RFC1P35251 1148 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 HOXD13P35453 343 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 PPM1AP35813 382 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 RECQLP46063 649 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 CD97P48960 835 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 AMPHP49418 695 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 AARSP49588 968 aaKnown RBP eCLIP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 LIG3P49916 1009 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TUBP50607 506 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 USP14P54578 494 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 RAB14P61106 215 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ARF3P61204 181 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 TSPAN5P62079 268 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 YWHAZP63104 245 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 EEF1A1P68104 462 aaKnown RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 NKX3-2P78367 333 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 KCNJ10P78508 379 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 IFI35P80217 286 aaPredicted RBP1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ABATP80404 500 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 RBP5P82980 135 aa1.84□□□□□ -2.11
NEDD4L-212ENST00000585594 ARF1P84077 181 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms