RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CCDC163A0A0D9SF12 145 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 OAZ2O95190 189 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 VNN2O95498 520 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 FGF19O95750 216 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 OR52Z1P0C646 297 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 MUTP22033 750 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 NPTX2P47972 431 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 TNK2Q07912 1038 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 DMP1Q13316 513 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-215ENST00000583328 COL9A2Q14055 689 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-215ENST00000583328 PTPAQ15257 358 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 ZNF174Q15697 407 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 ECM1Q16610 540 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 PLA2G2CQ5R387 149 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 PSAPL1Q6NUJ1 521 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 MPZL3Q6UWV2 235 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 GAREM2Q75VX8 874 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 DNAJB7Q7Z6W7 309 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-215ENST00000583328 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 BPIFB1Q8TDL5 484 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 MKNK1Q9BUB5 465 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 THG1LQ9NWX6 298 aaKnown RBP13.41□□□□□ -0.26
TOP3A-215ENST00000583328 KIAA1024Q9UPX6 916 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 ASB3Q9Y575 518 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 TICRRQ7Z2Z1 1910 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 OR6C75A6NL08 312 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 M0QZQ0 153 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ATG13O75143 517 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 PROZP22891 400 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 GABRR2P28476 465 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 MPLP40238 635 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
TOP3A-215ENST00000583328 GPR17Q13304 367 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 SLC10A6Q3KNW5 377 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ITPRIPL2Q3MIP1 535 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 CENPPQ6IPU0 288 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 PKN3Q6P5Z2 889 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 TAS1R3Q7RTX0 852 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ZBTB45Q96K62 511 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-215ENST00000583328 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 TUBGCP4Q9UGJ1 667 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 ZMIZ1Q9ULJ6 1067 aa13.4□□□□□ -0.26
TOP3A-215ENST00000583328 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
TOP3A-215ENST00000583328 COL4A2P08572 1712 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 MEFVO15553 781 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 HIP1RO75146 1068 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 AKAP3O75969 853 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 ITIH5Q86UX2 942 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 ZC3H10Q96K80 434 aaKnown RBP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 TASP1Q9H6P5 420 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 GKN1Q9NS71 199 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
TOP3A-215ENST00000583328 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
TOP3A-215ENST00000583328 ATRXP46100 2492 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 MTMR11A4FU01 709 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 ABLIM1O14639 778 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 SOAT2O75908 522 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 RHOBTB1O94844 696 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 WEE1P30291 646 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
TOP3A-215ENST00000583328 MCM2P49736 904 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 CYP4F8P98187 520 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 SPAG1Q07617 926 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 STRN3Q13033 797 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 PLK5Q496M5 336 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 TMEM196Q5HYL7 178 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 TCEAL6Q6IPX3 200 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 CAMKK1Q8N5S9 505 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 NSUN7Q8NE18 718 aaKnown RBP13.38□□□□□ -0.27
TOP3A-215ENST00000583328 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 GCNAQ96QF7 691 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 EDEM2Q9BV94 578 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 SMG9Q9H0W8 520 aaKnown RBP13.38□□□□□ -0.27
TOP3A-215ENST00000583328 ANKFY1Q9P2R3 1169 aa13.38□□□□□ -0.27
TOP3A-215ENST00000583328 C4orf47A7E2U8 309 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 GIPC1O14908 333 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 SLC16A4O15374 487 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 JAK2O60674 1132 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 TOM1L1O75674 476 aa13.37□□□□□ -0.27
TOP3A-215ENST00000583328 CAVIN2O95810 425 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms