RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 SUSD3Q96L08 255 aa16.55■□□□□ 0.24
IFT20-212ENST00000582797 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
IFT20-212ENST00000582797 FLNBO75369 2602 aaKnown RBP16.55■□□□□ 0.24
IFT20-212ENST00000582797 TNRC6BQ9UPQ9 1833 aaKnown RBP16.54■□□□□ 0.24
IFT20-212ENST00000582797 TAF4O00268 1085 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 HYAL3O43820 417 aaPredicted RBP16.54■□□□□ 0.24
IFT20-212ENST00000582797 RNF40O75150 1001 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 SPATA31C1P0DKV0 1188 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 CEACAM1P13688 526 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 MCM4P33991 863 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 GRM5P41594 1212 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 TXKP42681 527 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 NAMPTP43490 491 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 ELF2Q15723 593 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 CALCRLQ16602 461 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 TMEM196Q5HYL7 178 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 GPR158Q5T848 1215 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 DEFB124Q8NES8 71 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 CHFRQ96EP1 664 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 SMG9Q9H0W8 520 aaKnown RBP16.54■□□□□ 0.24
IFT20-212ENST00000582797 ATXN3LQ9H3M9 355 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 TMEM9BQ9NQ34 198 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 SLC38A7Q9NVC3 462 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 MAFFQ9ULX9 164 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 CACNA1EQ15878 2313 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 TSC2P49815 1807 aa16.54■□□□□ 0.24
IFT20-212ENST00000582797 PTPRDP23468 1912 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 PATE3B3GLJ2 98 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 WNT7AO00755 349 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 MEFVO15553 781 aaPredicted RBP16.53■□□□□ 0.24
IFT20-212ENST00000582797 ATG13O75143 517 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 EGFP01133 1207 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
IFT20-212ENST00000582797 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
IFT20-212ENST00000582797 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
IFT20-212ENST00000582797 DUSP4Q13115 394 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 NR5A1Q13285 461 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 CAMKK1Q8N5S9 505 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 BPIFB1Q8TDL5 484 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 CDT1Q9H211 546 aa16.53■□□□□ 0.24
IFT20-212ENST00000582797 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
IFT20-212ENST00000582797 HELZ2Q9BYK8 2649 aaKnown RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 OTOL1A6NHN0 477 aaPredicted RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 CDX4O14627 284 aaPredicted RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 CDC45O75419 566 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 MED24O75448 989 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 SOAT2O75908 522 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 RHOBTB1O94844 696 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 EPHB3P54753 998 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 CYP4F8P98187 520 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 PLCB2Q00722 1185 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 GRSF1Q12849 480 aaKnown RBP eCLIP16.52■□□□□ 0.24
IFT20-212ENST00000582797 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 CATSPER3Q86XQ3 398 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 TTC9BQ8N6N2 239 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 APPL2Q8NEU8 664 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 CCDC94Q9BW85 323 aaPredicted RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 FBRSL1Q9HCM7 1045 aaKnown RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 KLK13Q9UKR3 277 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 TNFSF13BQ9Y275 285 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 SLC27A5Q9Y2P5 690 aa16.52■□□□□ 0.24
IFT20-212ENST00000582797 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
IFT20-212ENST00000582797 PCNX2A6NKB5 2137 aa16.52■□□□□ 0.23
IFT20-212ENST00000582797 KCNE1P15382 129 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 GABRR2P28476 465 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 GBP1P32455 592 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 RPL9P32969 192 aaKnown RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 MCM2P49736 904 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 PLD1Q13393 1074 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 ZNF568Q3ZCX4 644 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 NAIF1Q69YI7 327 aaPredicted RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 DNAJB7Q7Z6W7 309 aaPredicted RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 POLR3CQ9BUI4 534 aaPredicted RBP16.51■□□□□ 0.23
IFT20-212ENST00000582797 HPS4Q9NQG7 708 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 GKN1Q9NS71 199 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 OBP2AQ9NY56 170 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 NEUROG3Q9Y4Z2 214 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 PI4KAP42356 2102 aa16.51■□□□□ 0.23
IFT20-212ENST00000582797 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
IFT20-212ENST00000582797 ZIC2O95409 532 aaPredicted RBP16.5■□□□□ 0.23
IFT20-212ENST00000582797 CYP11B2P19099 503 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 U2AF2P26368 475 aaKnown RBP eCLIP16.5■□□□□ 0.23
IFT20-212ENST00000582797 ALDH1A3P47895 512 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 EFNA5P52803 228 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
IFT20-212ENST00000582797 PPP2R5AQ15172 486 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 APBB1IPQ7Z5R6 666 aaPredicted RBP16.5■□□□□ 0.23
IFT20-212ENST00000582797 PSMG2Q969U7 264 aa16.5■□□□□ 0.23
IFT20-212ENST00000582797 EBF3Q9H4W6 596 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms