RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ASAP3Q8TDY4 903 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 LARP6Q9BRS8 491 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SEMA4CQ9C0C4 833 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DUSP15Q9H1R2 295 aaPredicted RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZSWIM4Q9H7M6 989 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CYP4F11Q9HBI6 524 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 KCNMB3Q9NPA1 279 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 BMP2KQ9NSY1 1161 aaPredicted RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PDRG1Q9NUG6 133 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 AFF4Q9UHB7 1163 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DDX25Q9UHL0 483 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SLC8A2Q9UPR5 921 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CYP46A1Q9Y6A2 500 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 UPK3BL1B0FP48 263 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 B8ZZF3 427 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 UPK3BL2E5RIL1 263 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 H7C4K7 107 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CAPN9O14815 690 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 KHNYNO15037 678 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TBX3O15119 743 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 LYPLA2O95372 231 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GCFC2P16383 781 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GLRA2P23416 452 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ITPKBP27987 946 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 WEE1P30291 646 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ABCG1P45844 678 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NEK4P51957 841 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CREB5Q02930 508 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TOB2Q14106 344 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PON2Q15165 354 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PTPAQ15257 358 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 UPP1Q16831 310 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TMEM196Q5HYL7 178 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CD300LGQ6UXG3 332 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CDR2LQ86X02 465 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DAGLBQ8NCG7 672 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SHKBP1Q8TBC3 707 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 BRF1Q92994 677 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 RSPRY1Q96DX4 576 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ZNF512Q96ME7 567 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PPP1R10Q96QC0 940 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TMEM209Q96SK2 561 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ADPGKQ9BRR6 497 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FZD8Q9H461 694 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CEP72Q9P209 647 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 EVLQ9UI08 416 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TPCN1Q9ULQ1 816 aa7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SPTBN1Q01082 2364 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FAM205CA6NFA0 338 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 M0R2N6 131 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SLC37A4O43826 429 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SEC24AO95486 1093 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PRKCBP05771 671 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 IFNAR1P17181 557 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PXNP49023 591 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PLD1Q13393 1074 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 MRPL58Q14197 206 aaKnown RBP7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 RABEP1Q15276 862 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TEAD2Q15562 447 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NTRK3Q16288 839 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 UAP1L1Q3KQV9 507 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ITPRIPL2Q3MIP1 535 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DCAF4L1Q3SXM0 396 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PPP4R3AQ6IN85 833 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GALNT17Q6IS24 598 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PKN3Q6P5Z2 889 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TMC8Q8IU68 726 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 C2orf40Q9H1Z8 148 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SLC32A1Q9H598 525 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PDZD7Q9H5P4 517 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ANKEF1Q9NU02 776 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SNTG2Q9NY99 539 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GTSE1Q9NYZ3 720 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 VPS54Q9P1Q0 977 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 EBF1Q9UH73 591 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DNMT3LQ9UJW3 386 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GON4LQ3T8J9 2241 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TRDMT1O14717 391 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CD2BP2O95400 341 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 LARGE1O95461 756 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 APBB3O95704 486 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FGF19O95750 216 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 MYL4P12829 197 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 RDXP35241 583 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 BRCC3P46736 316 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CLCNKBP51801 687 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NLRP5P59047 1200 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TWF1Q12792 350 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 LMAN2Q12907 356 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FBXO43Q4G163 708 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PMS2CLQ68D20 193 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ZNF280DQ6N043 979 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SYT13Q7L8C5 426 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 KRT25Q7Z3Z0 450 aa7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ARID3BQ8IVW6 561 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms