RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 BPIFB1Q8TDL5 484 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 IFT74Q96LB3 600 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 HHIPQ96QV1 700 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 MKNK1Q9BUB5 465 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 CRISPLD1Q9H336 500 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 THG1LQ9NWX6 298 aaKnown RBP17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 TNFSF13BQ9Y275 285 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 SLC27A5Q9Y2P5 690 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 TIMM13Q9Y5L4 95 aaPredicted RBP17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 GREB1Q4ZG55 1949 aa17.8■□□□□ 0.44
CTDNEP1-211ENST00000575783 LNP1A1A4G5 178 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 BCLAF3A2AJT9 711 aaKnown RBP17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 MED24O75448 989 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 VNN2O95498 520 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 PRAMEF12O95522 483 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 CEACAM1P13688 526 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 PTPAQ15257 358 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 ARHGAP15Q53QZ3 475 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 FSTL4Q6MZW2 842 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 KIAA1211LQ6NV74 962 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 GAREM2Q75VX8 874 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 DNAJB7Q7Z6W7 309 aaPredicted RBP17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 ACAP3Q96P50 834 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 SMG9Q9H0W8 520 aaKnown RBP17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 CDT1Q9H211 546 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 GKN1Q9NS71 199 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 OBP2AQ9NY56 170 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 PCDHB8Q9UN66 801 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 LAMA5O15230 3695 aa17.79■□□□□ 0.44
CTDNEP1-211ENST00000575783 NEMFO60524 1076 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 RNF40O75150 1001 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 CDKL5O76039 1030 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 KCNE1P15382 129 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 GABRR2P28476 465 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 GBP1P32455 592 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 YWHAHQ04917 246 aaPredicted RBP17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 UAP1L1Q3KQV9 507 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 TMEM196Q5HYL7 178 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 BEST2Q8NFU1 509 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 TCHPQ9BT92 498 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 TUFT1Q9NNX1 390 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 TMEM9BQ9NQ34 198 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 INVSQ9Y283 1065 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 CYP46A1Q9Y6A2 500 aa17.78■□□□□ 0.44
CTDNEP1-211ENST00000575783 ITPR1Q14643 2758 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 KHNYNO15037 678 aaKnown RBP17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 SOAT2O75908 522 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 EGFP01133 1207 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 KRT2P35908 639 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 DEFB124Q8NES8 71 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 MTMR9Q96QG7 549 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 ACO2Q99798 780 aaKnown RBP17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 FREM2Q5SZK8 3169 aa17.77■□□□□ 0.44
CTDNEP1-211ENST00000575783 CCDC169A6NNP5 214 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 WNT7AO00755 349 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 OAZ2O95190 189 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 FGF19O95750 216 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 HARSP12081 509 aaKnown RBP17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 CSRP1P21291 193 aaKnown RBP17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 MCM2P49736 904 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 CYP4F8P98187 520 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 RUNX3Q13761 415 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 TMEM130Q8N3G9 435 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 ATAD1Q8NBU5 361 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 PSMG2Q969U7 264 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 EBF3Q9H4W6 596 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 TASP1Q9H6P5 420 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 FBRSL1Q9HCM7 1045 aaKnown RBP17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 PTPRHQ9HD43 1115 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 CNTN3Q9P232 1028 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 ASB3Q9Y575 518 aa17.76■□□□□ 0.43
CTDNEP1-211ENST00000575783 OTOL1A6NHN0 477 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 PATE3B3GLJ2 98 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 CDX4O14627 284 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TRDMT1O14717 391 aaKnown RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 HYAL3O43820 417 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 U2AF2P26368 475 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 SCRN1Q12765 414 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 GPR17Q13304 367 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TRIM68Q6AZZ1 485 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 CENPPQ6IPU0 288 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 USP37Q86T82 979 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 KIF12Q96FN5 646 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 POLR3CQ9BUI4 534 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TMEM60Q9H2L4 133 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 TUBGCP4Q9UGJ1 667 aa17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 SETXQ7Z333 2677 aaKnown RBP17.75■□□□□ 0.43
CTDNEP1-211ENST00000575783 LOC400499M0QZD8 3231 aa17.74■□□□□ 0.43
CTDNEP1-211ENST00000575783 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
CTDNEP1-211ENST00000575783 APBB3O95704 486 aa17.74■□□□□ 0.43
CTDNEP1-211ENST00000575783 GALK1P51570 392 aa17.74■□□□□ 0.43
CTDNEP1-211ENST00000575783 CDR1P51861 262 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms