RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZCCHC9Q8N567 271 aaKnown RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 MGARPQ8TDB4 240 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 DYDC1Q8WWB3 177 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 RBM41Q96IZ5 413 aaKnown RBP9.48□□□□□ -0.89
NCBP3-204ENST00000574911 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 PCYT2Q99447 389 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 NAALADL1Q9UQQ1 740 aa9.48□□□□□ -0.89
NCBP3-204ENST00000574911 GSTTP1A0A1W2PQM5 241 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 FOXO6A8MYZ6 492 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CST3P01034 146 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 BRAFP15056 766 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 GJC1P36383 396 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 SSR1P43307 286 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 AP3M2P53677 418 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 RPL7AP62424 266 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 LMNB2Q03252 620 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CAPSQ13938 189 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ATP13A4Q4VNC1 1196 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 EAPPQ56P03 285 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 LRRC38Q5VT99 294 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CEP128Q6ZU80 1094 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 PRUNE1Q86TP1 453 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 DNERQ8NFT8 737 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CCHCR1Q8TD31 782 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 FZD1Q9UP38 647 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 USP15Q9Y4E8 981 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ACTL7BQ9Y614 415 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 DNALI1O14645 258 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CHUKO15111 745 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 FAM189A1O60320 539 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CDH16O75309 829 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 LSM8O95777 96 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CALB1P05937 261 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 TCF4P15884 667 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 PTPN7P35236 360 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CETN2P41208 172 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 MAGEA4P43358 317 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 MCL1Q07820 350 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 SF3A3Q12874 501 aaKnown RBP eCLIP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 P3H1Q32P28 736 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 SEZ6Q53EL9 994 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ZPBP2Q6X784 338 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 WDR49Q8IV35 697 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 C9orf72Q96LT7 481 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CD248Q9HCU0 757 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 KCNK9Q9NPC2 374 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 KLHL11Q9NVR0 708 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 HOXC10Q9NYD6 342 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 DRG1Q9Y295 367 aaKnown RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 PI4K2BG5E9Z4 385 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 KRT1P04264 644 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 KRT10P13645 584 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CNTN2Q02246 1040 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 PRAMEF18Q5VWM3 479 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 MFSD7Q6UXD7 560 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 GSTA5Q7RTV2 222 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ALLCQ8N6M5 410 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 ANKRD42Q8N9B4 389 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CHST13Q8NET6 341 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 SLC16A10Q8TF71 515 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 MAML1Q92585 1016 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC77Q9BR77 488 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 NRBP2Q9NSY0 501 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 DNPEPQ9ULA0 475 aa9.47□□□□□ -0.89
NCBP3-204ENST00000574911 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 MGRN1O60291 552 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 TJP3O95049 919 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 UBA1P22314 1058 aaKnown RBP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 TNFSF9P41273 254 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 ALDH5A1P51649 535 aaPredicted RBP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 COPS2P61201 443 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 OGDHQ02218 1023 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 SNCBQ16143 134 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 GALNTL6Q49A17 601 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM63BQ5T3F8 832 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 KAZNQ674X7 775 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 SPOCD1Q6ZMY3 1216 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 FAM228AQ86W67 206 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 GLIS1Q8NBF1 620 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 MAGEC3Q8TD91 643 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 KLRG1Q96E93 195 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 RBM15Q96T37 977 aaKnown RBP eCLIP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 ABCF3Q9NUQ8 709 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 PRKAG3Q9UGI9 489 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 TPX2Q9ULW0 747 aaKnown RBP9.46□□□□□ -0.89
NCBP3-204ENST00000574911 AFG3L2Q9Y4W6 797 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.89
NCBP3-204ENST00000574911 GOLGB1Q14789 3259 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms