RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PROKR1Q8TCW9 393 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 MLST8Q9BVC4 326 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 TEX101Q9BY14 249 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 FBXO34Q9NWN3 711 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 PCDHA13Q9Y5I0 950 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 FPGT-TNNI3KV9GXZ4 949 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 METP08581 1390 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 MYO5BQ9ULV0 1848 aa5.25□□□□□ -1.57
NUP88-202ENST00000570937 ADGRF5Q8IZF2 1346 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 NEXMIFQ5QGS0 1516 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CENPVL1A0A0U1RR11 272 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CCDC154A6NI56 674 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 KRT4P19013 534 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CCND1P24385 295 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 TGFB2P61812 414 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 PURAQ00577 322 aaKnown RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 RAB39AQ14964 217 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 KCNV1Q6PIU1 500 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 DCBLD1Q8N8Z6 715 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 NLGN4YQ8NFZ3 816 aaPredicted RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 OR56A1Q8NGH5 318 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CHMP4CQ96CF2 233 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 MRGPRX4Q96LA9 322 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 SMAD5Q99717 465 aaKnown RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 REXO4Q9GZR2 422 aaKnown RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 C11orf54Q9H0W9 315 aaPredicted RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 TCF7L1Q9HCS4 588 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CALCOCO1Q9P1Z2 691 aa5.24□□□□□ -1.57
NUP88-202ENST00000570937 CFAP20Q9Y6A4 193 aaKnown RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 DHX57Q6P158 1386 aaKnown RBP5.24□□□□□ -1.57
NUP88-202ENST00000570937 hCG_2014768A0A024R1R8 64 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 RPLP2P05387 115 aaKnown RBP5.23□□□□□ -1.57
NUP88-202ENST00000570937 HLA-DOAP06340 250 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 ELANEP08246 267 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 HMGA2P52926 109 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 INHBCP55103 352 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 IL10RAQ13651 578 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 PTPAQ15257 358 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 TSHZ3Q63HK5 1081 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 PCSK4Q6UW60 755 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 UBE3BQ7Z3V4 1068 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 RSPH3Q86UC2 560 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 CMTR2Q8IYT2 770 aaKnown RBP5.23□□□□□ -1.57
NUP88-202ENST00000570937 NSUN6Q8TEA1 469 aaKnown RBP5.23□□□□□ -1.57
NUP88-202ENST00000570937 FUBP1Q96AE4 644 aaKnown RBP5.23□□□□□ -1.57
NUP88-202ENST00000570937 TMX3Q96JJ7 454 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 PHACTR3Q96KR7 559 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 DMRTA2Q96SC8 542 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 ADAM2Q99965 735 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 RNPEPQ9H4A4 650 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 STK26Q9P289 416 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 RUVBL1Q9Y265 456 aaKnown RBP5.23□□□□□ -1.57
NUP88-202ENST00000570937 PCDHB1Q9Y5F3 818 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 NWD1Q149M9 1564 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 COL4A3Q01955 1670 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 PIK3C2GO75747 1445 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 FAM135BQ49AJ0 1406 aa5.23□□□□□ -1.57
NUP88-202ENST00000570937 MYOM2P54296 1465 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 ABCC11Q96J66 1382 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 A0A1B0GTW7 788 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 TMEM191CA6NGB0 347 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 FOXN1O15353 648 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 LPXNO60711 386 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 PRSS23O95084 383 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 NDUFA10O95299 355 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 CKBP12277 381 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 NCLP19338 710 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 SLC6A2P23975 617 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 HSPA1LP34931 641 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 NEK2P51955 445 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 ANAPC15P60006 121 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 DSC2Q02487 901 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 CREMQ03060 361 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 TAP1Q03518 808 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 UAP1L1Q3KQV9 507 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 MRGPRGQ86SM5 289 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 TTC7BQ86TV6 843 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 MAPKAPK5Q8IW41 473 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 MIER2Q8N344 545 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 TMEM132CQ8N3T6 1108 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 FITM2Q8N6M3 262 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 CPEB3Q8NE35 698 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 NUP133Q8WUM0 1156 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 CHD2O14647 1828 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 ALKQ9UM73 1620 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 DCCP43146 1447 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 PTPRUQ92729 1446 aa5.22□□□□□ -1.57
NUP88-202ENST00000570937 WDR33Q9C0J8 1336 aaKnown RBP5.22□□□□□ -1.57
NUP88-202ENST00000570937 LRPPRCP42704 1394 aaKnown RBP5.21□□□□□ -1.58
NUP88-202ENST00000570937 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 MTHFD1P11586 935 aaKnown RBP5.21□□□□□ -1.58
NUP88-202ENST00000570937 DDX6P26196 483 aaKnown RBP eCLIP5.21□□□□□ -1.58
NUP88-202ENST00000570937 SLC6A4P31645 630 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 IGBP1P78318 339 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 OCA2Q04671 838 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 TLE1Q04724 770 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms