RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 CES2O00748 559 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 CILPO75339 1184 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 MYBL1P10243 752 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 BRD2P25440 801 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 NSFP46459 744 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 ITIH3Q06033 890 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 ZNF394Q53GI3 561 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 GLRA4Q5JXX5 417 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 TWF2Q6IBS0 349 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 PHF13Q86YI8 300 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 PASD1Q8IV76 773 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 NOA1Q8NC60 698 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 BEST2Q8NFU1 509 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 CAGE1Q8TC20 777 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 TRIM11Q96F44 468 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 TSEN34Q9BSV6 310 aaKnown RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 NUP85Q9BW27 656 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 PDCL3Q9H2J4 239 aa24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 CHORDC1Q9UHD1 332 aaPredicted RBP24.03■■□□□ 1.44
VCPKMT-205ENST00000569518 SMIM28A0A1B0GU29 152 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 LSM8O95777 96 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 PAEPP09466 180 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 THPOP40225 353 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 RAD23BP54727 409 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 INCA1Q0VD86 236 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 PTK7Q13308 1070 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 TRIM71Q2Q1W2 868 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 PPP1R2P3Q6NXS1 205 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 GPR161Q8N6U8 529 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 ARRDC4Q8NCT1 418 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 CHST12Q9NRB3 414 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 RNF14Q9UBS8 474 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 CNOT8Q9UFF9 292 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 UBQLN1Q9UMX0 589 aaKnown RBP24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 PCDHGC3Q9UN70 934 aa24.02■■□□□ 1.44
VCPKMT-205ENST00000569518 PPEF2O14830 753 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 GRK4P32298 578 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 LRRC52Q8N7C0 313 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 ZNF564Q8TBZ8 553 aaPredicted RBP24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 VCPIP1Q96JH7 1222 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 HMX1Q9NP08 348 aaPredicted RBP24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 TRMT13Q9NUP7 481 aaKnown RBP24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 HMGXB4Q9UGU5 601 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 AMFRQ9UKV5 643 aa24.01■■□□□ 1.43
VCPKMT-205ENST00000569518 SSTR3P32745 418 aaPredicted RBP24■■□□□ 1.43
VCPKMT-205ENST00000569518 CDH5P33151 784 aaPredicted RBP24■■□□□ 1.43
VCPKMT-205ENST00000569518 DNA2P51530 1060 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 MYO1EQ12965 1108 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 PTP4A2Q12974 167 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 PTPROQ16827 1216 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 TWNKQ96RR1 684 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 OSBPL7Q9BZF2 842 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 AGO3Q9H9G7 860 aaKnown RBP24■■□□□ 1.43
VCPKMT-205ENST00000569518 KLK14Q9P0G3 267 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 PARP2Q9UGN5 583 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 TNNC1P63316 161 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 FBXO47Q5MNV8 452 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 C9orf57Q5W0N0 161 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 SLC4A11Q8NBS3 891 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 ELOVL4Q9GZR5 314 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 EPC1Q9H2F5 836 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 ERVK-5Q9HDB9 667 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 EHD2Q9NZN4 543 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 PTCH2Q9Y6C5 1203 aa24■■□□□ 1.43
VCPKMT-205ENST00000569518 KCNK3O14649 394 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 RRM1P23921 792 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 C1QBPQ07021 282 aaKnown RBP23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 FAM26DQ5JW98 314 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 MS4A14Q96JA4 679 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 PBKQ96KB5 322 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 GLT1D1Q96MS3 346 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 RNF19AQ9NV58 838 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 SMARCAL1Q9NZC9 954 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 ALG6Q9Y672 507 aa23.99■■□□□ 1.43
VCPKMT-205ENST00000569518 GPR182O15218 404 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 CD4P01730 458 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 H2AFXP16104 143 aaPredicted RBP23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 NFX1Q12986 1120 aaKnown RBP23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 CFAP221Q4G0U5 840 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 TTC39CQ8N584 583 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 ANKZF1Q9H8Y5 726 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 FAM105AQ9NUU6 356 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 BARX2Q9UMQ3 279 aaPredicted RBP23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 PIRO00625 290 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 DDX3YO15523 660 aaKnown RBP23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 CYP3A5P20815 502 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 MMP8P22894 467 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 CCDC181Q5TID7 509 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 MMS22LQ6ZRQ5 1243 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 SLC43A3Q8NBI5 491 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 MSANTD4Q8NCY6 345 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 SPATA4Q8NEY3 305 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 TMEM176AQ96HP8 235 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 RPS6KC1Q96S38 1066 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 C11orf70Q9BRQ4 267 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 ZNF518BQ9C0D4 1074 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 ADAM22Q9P0K1 906 aa23.98■■□□□ 1.43
VCPKMT-205ENST00000569518 PTGESO14684 152 aa23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 TLR3O15455 904 aaKnown RBP23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 PAFAH1B1P43034 410 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms