RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 TNNI1P19237 187 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 PNPLA4P41247 253 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 RBP5P82980 135 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 YWHAHQ04917 246 aaPredicted RBP10.56□□□□□ -0.72
CLK3-220ENST00000567992 ZP2Q05996 745 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 ITIH3Q06033 890 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 SV2CQ496J9 727 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 TDRD10Q5VZ19 366 aaKnown RBP10.56□□□□□ -0.72
CLK3-220ENST00000567992 CEP135Q66GS9 1140 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 OVOS1Q6IE37 1185 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 TMC5Q6UXY8 1006 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 C15orf39Q6ZRI6 1047 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 LIMS2Q7Z4I7 341 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 KREMEN2Q8NCW0 462 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 OR10T2Q8NGX3 314 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 ANKRD36BP1Q96IX9 119 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 FNBP1Q96RU3 617 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 RHOBTB2Q9BYZ6 727 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 GTPBP4Q9BZE4 634 aaKnown RBP10.56□□□□□ -0.72
CLK3-220ENST00000567992 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 CD320Q9NPF0 282 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 GDAP2Q9NXN4 497 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 KIAA1468Q9P260 1216 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 DOCK6Q96HP0 2047 aa10.56□□□□□ -0.72
CLK3-220ENST00000567992 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 CYB561D2O14569 222 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 VNN1O95497 513 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 CST3P01034 146 aaPredicted RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 C4BPAP04003 597 aaKnown RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 KRT19P08727 400 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 OR4Q2P0C623 313 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 TRIM49P0CI25 452 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 TRIM49CP0CI26 452 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 CCNE1P24864 410 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 RPL13P26373 211 aaKnown RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 LRRC63Q05C16 580 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ENPEPQ07075 957 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 BFSP1Q12934 665 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ADAM9Q13443 819 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 WSCD1Q658N2 575 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 TTI2Q6NXR4 508 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 OSTM1Q86WC4 334 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ADHFE1Q8IWW8 467 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 FAM186BQ8IYM0 893 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 PDCL2Q8N4E4 241 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ZNF461Q8TAF7 563 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 EEF2KMTQ96G04 330 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 DHTKD1Q96HY7 919 aaPredicted RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 TMEM209Q96SK2 561 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 UHRF1Q96T88 793 aaPredicted RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
CLK3-220ENST00000567992 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 POMKQ9H5K3 350 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 PRKAG3Q9UGI9 489 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
CLK3-220ENST00000567992 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 PSMA7O14818 248 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 HCRTO43612 131 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 SEC24AO95486 1093 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
CLK3-220ENST00000567992 C8AP07357 584 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 POU2F2P09086 479 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 ATF2P15336 505 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 HOXA9P31269 272 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
CLK3-220ENST00000567992 PPP3CAQ08209 521 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 SOWAHAQ2M3V2 549 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 ZACNQ401N2 412 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 TPGS2Q68CL5 300 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 FOXR2Q6PJQ5 311 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 INTS8Q75QN2 995 aaKnown RBP10.54□□□□□ -0.72
CLK3-220ENST00000567992 USP37Q86T82 979 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 TCEAL8Q8IYN2 117 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 TOP6BLQ8N6T0 577 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 TRIML1Q8N9V2 468 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 KBTBD7Q8WVZ9 684 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 HPDLQ96IR7 371 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 MED15Q96RN5 788 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
CLK3-220ENST00000567992 ZCWPW1Q9H0M4 648 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
CLK3-220ENST00000567992 DPP7Q9UHL4 492 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms