RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 PRAMEF12O95522 483 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 FGF19O95750 216 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 XBP1P17861 261 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 MCM4P33991 863 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
CDH3-205ENST00000566808 CALCRLQ16602 461 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 FSTL4Q6MZW2 842 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 ALKAL1Q6UXT8 129 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 CEP120Q8N960 986 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 DDX12PQ92771 950 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 DENND4CQ5VZ89 1909 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 ACACAQ13085 2346 aa18.4■□□□□ 0.54
CDH3-205ENST00000566808 KHNYNO15037 678 aaKnown RBP18.39■□□□□ 0.53
CDH3-205ENST00000566808 KCNE1P15382 129 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 PSMA5P28066 241 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 WEE1P30291 646 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 HSPA4P34932 840 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 ARHGAP15Q53QZ3 475 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 GPR158Q5T848 1215 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 NT5DC1Q5TFE4 455 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 GAREM2Q75VX8 874 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 OXER1Q8TDS5 423 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 ZMAT2Q96NC0 199 aaKnown RBP18.39■□□□□ 0.53
CDH3-205ENST00000566808 KIFC3Q9BVG8 833 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 OXCT2Q9BYC2 517 aaPredicted RBP18.39■□□□□ 0.53
CDH3-205ENST00000566808 THG1LQ9NWX6 298 aaKnown RBP18.39■□□□□ 0.53
CDH3-205ENST00000566808 PCDHB8Q9UN66 801 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 TNFSF13BQ9Y275 285 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 ASB3Q9Y575 518 aa18.39■□□□□ 0.53
CDH3-205ENST00000566808 A0A087WWV3 80 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 RNF40O75150 1001 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 CDC45O75419 566 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 VNN2O95498 520 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 APBB3O95704 486 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 ALDH1A3P47895 512 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
CDH3-205ENST00000566808 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
CDH3-205ENST00000566808 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 KIAA1211LQ6NV74 962 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 C11orf74Q86VG3 221 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 GPIHBP1Q8IV16 184 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 KIF12Q96FN5 646 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 ZNF274Q96GC6 653 aaPredicted RBP18.38■□□□□ 0.53
CDH3-205ENST00000566808 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 CDT1Q9H211 546 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 ATXN3LQ9H3M9 355 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 CNTN3Q9P232 1028 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 MSRB2Q9Y3D2 182 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 PI4KAP42356 2102 aa18.38■□□□□ 0.53
CDH3-205ENST00000566808 TSC2P49815 1807 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 OBSL1O75147 1896 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 CDX4O14627 284 aaPredicted RBP18.37■□□□□ 0.53
CDH3-205ENST00000566808 TRDMT1O14717 391 aaKnown RBP18.37■□□□□ 0.53
CDH3-205ENST00000566808 NEMFO60524 1076 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 CYP11B2P19099 503 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 GBP1P32455 592 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
CDH3-205ENST00000566808 DEFB124Q8NES8 71 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 PSMG2Q969U7 264 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 IFT74Q96LB3 600 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 PGLYRP2Q96PD5 576 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 CRISPLD1Q9H336 500 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 TUFT1Q9NNX1 390 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 EBF1Q9UH73 591 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 STK36Q9NRP7 1315 aa18.37■□□□□ 0.53
CDH3-205ENST00000566808 TNRC6BQ9UPQ9 1833 aaKnown RBP18.37■□□□□ 0.53
CDH3-205ENST00000566808 FAM205CA6NFA0 338 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 DCLK1O15075 740 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 HYAL3O43820 417 aaPredicted RBP18.36■□□□□ 0.53
CDH3-205ENST00000566808 CDKL5O76039 1030 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 GABRR2P28476 465 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 MARCKSP29966 332 aaPredicted RBP18.36■□□□□ 0.53
CDH3-205ENST00000566808 OSTNP61366 133 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 DUSP4Q13115 394 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 FBXO43Q4G163 708 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 PMS2CLQ68D20 193 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 PADI6Q6TGC4 694 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 PHLPP2Q6ZVD8 1323 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 SYT13Q7L8C5 426 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 CYP2U1Q7Z449 544 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 ACDQ96AP0 544 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 C18orf25Q96B23 403 aaPredicted RBP18.36■□□□□ 0.53
CDH3-205ENST00000566808 CHFRQ96EP1 664 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
CDH3-205ENST00000566808 APC2O95996 2303 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 BPTFQ12830 3046 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 OR6C75A6NL08 312 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 OAZ2O95190 189 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 EGFP01133 1207 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 DRD1P21728 446 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 TXKP42681 527 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 AMPD2Q01433 879 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 DNAJB7Q7Z6W7 309 aaPredicted RBP18.35■□□□□ 0.53
CDH3-205ENST00000566808 ITIH5Q86UX2 942 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 GCNAQ96QF7 691 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 NACC1Q96RE7 527 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 FAM83CQ9BQN1 747 aa18.35■□□□□ 0.53
CDH3-205ENST00000566808 HPS4Q9NQG7 708 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms