RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 MMP17Q9ULZ9 603 aa6.71□□□□□ -1.33
UBE3A-205ENST00000566215 SLC8A2Q9UPR5 921 aa6.71□□□□□ -1.33
UBE3A-205ENST00000566215 SMIM28A0A1B0GU29 152 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 CAVIN2O95810 425 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 GUCY2CP25092 1073 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 TKTP29401 623 aaKnown RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 AKAP17AQ02040 695 aaKnown RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SSRP1Q08945 709 aaKnown RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 ZNF77Q15935 545 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 NT5DC1Q5TFE4 455 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SMYD5Q6GMV2 418 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 CEP68Q76N32 757 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SYT12Q8IV01 421 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 YAF2Q8IY57 180 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SPATA17Q96L03 361 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 ZFP42Q96MM3 310 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 CCDC94Q9BW85 323 aaPredicted RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 POLR3FQ9H1D9 316 aaPredicted RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 ARRDC1-AS1Q9H2J1 176 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 TP53BP1Q12888 1972 aaPredicted RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 GFRA2O00451 464 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 PODXLO00592 558 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SLC37A4O43826 429 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 TDP2O95551 362 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 PRKCBP05771 671 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 C1SP09871 688 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 MAPTP10636 758 aaKnown RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SP100P23497 879 aaPredicted RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 NTHL1P78549 312 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 RUNX3Q13761 415 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 DUOXA1Q1HG43 343 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 SNX30Q5VWJ9 437 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 TMPRSS7Q7RTY8 843 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 MON1AQ86VX9 555 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 DDX42Q86XP3 938 aaKnown RBP eCLIP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 KSR1Q8IVT5 923 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 OSCP1Q8WVF1 389 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 HVCN1Q96D96 273 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 RSPRY1Q96DX4 576 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 PGBD1Q96JS3 809 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 TTC12Q9H892 705 aaPredicted RBP6.71□□□□□ -1.34
UBE3A-205ENST00000566215 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 HPS4Q9NQG7 708 aa6.71□□□□□ -1.34
UBE3A-205ENST00000566215 C1QTNF9BB2RNN3 333 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 F11P03951 625 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 C1QTNF9P0C862 333 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 USP39Q53GS9 565 aaKnown RBP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 XKR9Q5GH70 373 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 ZNF579Q8NAF0 562 aaKnown RBP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 ATP2A3Q93084 1043 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 FUBP3Q96I24 572 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 TTLL2Q9BWV7 592 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 HCFC1R1Q9NWW0 138 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 STYXL1Q9Y6J8 313 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 ADAMTS3O15072 1205 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 CCNE1P24864 410 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 PRPHP41219 470 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 PLA2G4FQ68DD2 849 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 MPZL3Q6UWV2 235 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 TMEM143Q96AN5 459 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 PKMYT1Q99640 499 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 MRPL4Q9BYD3 311 aaKnown RBP6.7□□□□□ -1.34
UBE3A-205ENST00000566215 GBP3Q9H0R5 595 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 SUSD2Q9UGT4 822 aa6.7□□□□□ -1.34
UBE3A-205ENST00000566215 LNP1A1A4G5 178 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 FAM189A1O60320 539 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CBFA2T3O75081 653 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 ALDH1A2O94788 518 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBE3A-205ENST00000566215 TUBP50607 506 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CLCNKBP51801 687 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 NLRP5P59047 1200 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CYP4A11Q02928 519 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 RING1Q06587 406 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 ATF7IP2Q5U623 682 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 PHTF2Q8N3S3 785 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 USP33Q8TEY7 942 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CD101Q93033 1021 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 MCRS1Q96EZ8 462 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 KIF12Q96FN5 646 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 FAM124BQ9H5Z6 455 aaPredicted RBP6.69□□□□□ -1.34
UBE3A-205ENST00000566215 PRORYQ9H606 182 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 UBQLN1Q9UMX0 589 aaKnown RBP6.69□□□□□ -1.34
UBE3A-205ENST00000566215 ARHGAP26Q9UNA1 814 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 COL27A1Q8IZC6 1860 aaPredicted RBP6.69□□□□□ -1.34
UBE3A-205ENST00000566215 FAM205CA6NFA0 338 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 DFNA5O60443 496 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 HAPLN1P10915 354 aaPredicted RBP6.69□□□□□ -1.34
UBE3A-205ENST00000566215 SLC7A9P82251 487 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 PSMD2Q13200 908 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 ENPP2Q13822 863 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 IL27RAQ6UWB1 636 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 SKAP1Q86WV1 359 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CMTM8Q8IZV2 173 aa6.69□□□□□ -1.34
UBE3A-205ENST00000566215 CADM4Q8NFZ8 388 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms