RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 CDC37Q16543 378 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 ASTE1Q2TB18 679 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FAM153CQ494X1 144 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 CCDC178Q5BJE1 867 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 ANKRD20A8PQ5CZ79 823 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 CENPPQ6IPU0 288 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FOXR2Q6PJQ5 311 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 CACNA2D4Q7Z3S7 1137 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 KRT26Q7Z3Y9 468 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FMNL3Q8IVF7 1028 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 CACNA2D3Q8IZS8 1091 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 SRBD1Q8N5C6 995 aaKnown RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 IFT81Q8WYA0 676 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TAF4BQ92750 862 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 SYN2Q92777 582 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 N4BP2L2Q92802 583 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 MIEF2Q96C03 454 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 SGSM3Q96HU1 749 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 PBKQ96KB5 322 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FCRL2Q96LA5 508 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 KRT12Q99456 494 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TSG101Q99816 390 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TLR10Q9BXR5 811 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 BRINP2Q9C0B6 783 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 NDST4Q9H3R1 872 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 CENPHQ9H3R5 247 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TAF1DQ9H5J8 278 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 ATP6V0A4Q9HBG4 840 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 METTL5Q9NRN9 209 aaKnown RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TCP11L1Q9NUJ3 509 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 PRR13Q9NZ81 148 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 LRP2BPQ9P2M1 347 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FAM153AQ9UHL3 310 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 TRMT112Q9UI30 125 aaKnown RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 PCDHGB7Q9Y5F8 929 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 FLT1P17948 1338 aa5.13□□□□□ -1.59
CAPN3-212ENST00000564503 COL14A1Q05707 1796 aaKnown RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 GREB1LQ9C091 1923 aaPredicted RBP5.13□□□□□ -1.59
CAPN3-212ENST00000564503 COL4A1P02462 1669 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 A0A1B0GUA9 196 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 PVALEFA0A1B0GWK0 134 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 WTIPA6NIX2 430 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 LRRC53A6NM62 1247 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 BTNL10A8MVZ5 291 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CCDC188H7C350 402 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 RAD51CO43502 376 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 TRAPPC3O43617 180 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 PALMO75781 387 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 STARD3NLO95772 234 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 RECKO95980 971 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GSTA1P08263 222 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 OR52Z1P0C646 297 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CALRP27797 417 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GNAQP50148 359 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GUCY2FP51841 1108 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SEC24CP53992 1094 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 RACK1P63244 317 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 MRPS25P82663 173 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SRSF3P84103 164 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 LRRC63Q05C16 580 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GFPT1Q06210 699 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 NAB2Q15742 525 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 HLFQ16534 295 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 PTPROQ16827 1216 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 HSF5Q4G112 596 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SPDYCQ5MJ68 293 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SFMBT2Q5VUG0 894 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GALNT18Q6P9A2 607 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CYB5D1Q6P9G0 228 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 UNC13DQ70J99 1090 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 RRAGAQ7L523 313 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 DNAJC10Q8IXB1 793 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 TEX11Q8IYF3 940 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 FUKQ8N0W3 1084 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 GUF1Q8N442 669 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 TAB3Q8N5C8 712 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 MIGA1Q8NAN2 632 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 USP38Q8NB14 1042 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CCHCR1Q8TD31 782 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SDR42E1Q8WUS8 393 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CENPTQ96BT3 561 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 MTMR8Q96EF0 704 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CALML4Q96GE6 196 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 MS4A14Q96JA4 679 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SEC16BQ96JE7 1060 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 INPP4AQ96PE3 977 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 FERD3LQ96RJ6 166 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CDADC1Q9BWV3 514 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 TRIM9Q9C026 710 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 LRRC27Q9C0I9 530 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 MMRN2Q9H8L6 949 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 CNOT10Q9H9A5 744 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 RIC8AQ9NPQ8 531 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 PPANQ9NQ55 473 aaKnown RBP5.12□□□□□ -1.59
CAPN3-212ENST00000564503 ERVK13-1Q9NX77 482 aa5.12□□□□□ -1.59
CAPN3-212ENST00000564503 SMARCAL1Q9NZC9 954 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms