RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 MED7O43513 233 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 ATP9AO75110 1047 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PGM5Q15124 567 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 MCEEQ96PE7 176 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 PARVAQ9NVD7 372 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 GJB6O95452 261 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 CALB1P05937 261 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 GPC3P51654 580 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 ITGA8P53708 1063 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 P3H1Q32P28 736 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 NOP9Q86U38 636 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 ANKMY2Q8IV38 441 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 C4orf19Q8IY42 314 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 RNF169Q8NCN4 708 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 RBM15Q96T37 977 aaKnown RBP eCLIP11.04□□□□□ -0.64
RNF40-204ENST00000563683 MRIQ9BWK5 157 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 VCXQ9H320 206 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PXMP2Q9NR77 195 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PAPOLBQ9NRJ5 636 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 GGA3Q9NZ52 723 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 IP6K2Q9UHH9 426 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 NUP98P52948 1817 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 I3L4J1 428 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 RARGP13631 454 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 CDC25CP30307 473 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 SNX16P57768 344 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 GPR162Q16538 588 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 CCDC62Q6P9F0 684 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 ZC3H18Q86VM9 953 aaKnown RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 NME8Q8N427 588 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 STMN2Q93045 179 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 KIAA0391O15091 583 aaKnown RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 KRT10P13645 584 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 MUTP22033 750 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 ROR2Q01974 943 aaKnown RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 SMTNL2Q2TAL5 461 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 SPATA33Q96N06 139 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 LRRC4CQ9HCJ2 640 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 COL18A1P39060 1754 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 MT-ND3P03897 115 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 LINGO3P0C6S8 592 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 GZMAP12544 262 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 GTF2H1P32780 548 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 BACE1P56817 501 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 CFAP157Q5JU67 520 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 THEMIS2Q5TEJ8 643 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 AGGF1Q8N302 714 aaeCLIP11.03□□□□□ -0.64
RNF40-204ENST00000563683 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
RNF40-204ENST00000563683 ETNK1Q9HBU6 452 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 LRRC42Q9Y546 428 aa11.03□□□□□ -0.64
RNF40-204ENST00000563683 A6NJR5 290 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 CAPN9O14815 690 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 MYBL1P10243 752 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 SESN3P58005 492 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 AUHQ13825 339 aaKnown RBP11.02□□□□□ -0.64
RNF40-204ENST00000563683 PARP6Q2NL67 630 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 CMPK2Q5EBM0 449 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 RNF43Q68DV7 783 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 TRMT10CQ7L0Y3 403 aaKnown RBP11.02□□□□□ -0.64
RNF40-204ENST00000563683 TRIM50Q86XT4 487 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 TRAIPQ9BWF2 469 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.64
RNF40-204ENST00000563683 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 MAFGO15525 162 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 RIPK2O43353 540 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 EXTL3O43909 919 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 AP1G2O75843 785 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 PRKCBP05771 671 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 KRT3P12035 628 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 CCNB1P14635 433 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 ITIH2P19823 946 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 CALB2P22676 271 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 SLC1A1P43005 524 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 INHBEP58166 350 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 IRX4P78413 519 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 SURF1Q15526 300 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 SMAD1Q15797 465 aaKnown RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 CWF19L1Q69YN2 538 aaKnown RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 FAM83AQ86UY5 434 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 PALB2Q86YC2 1186 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
RNF40-204ENST00000563683 SERPINB12Q96P63 405 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 RPS6KC1Q96S38 1066 aa11.02□□□□□ -0.65
RNF40-204ENST00000563683 RNPEPL1Q9HAU8 725 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms