RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 SMAD3P84022 425 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 FANCCQ00597 558 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 TAP1Q03518 808 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 BIRC3Q13489 604 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 NCOA4Q13772 614 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 RAB30Q15771 203 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 SPOPLQ6IQ16 392 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 DPY19L2P1Q6NXN4 242 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 KCNT2Q6UVM3 1135 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 FBXL13Q8NEE6 735 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 LMO3Q8TAP4 145 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 ELMO3Q96BJ8 720 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 ZNF560Q96MR9 790 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 ZNF558Q96NG5 402 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 FAM193BQ96PV7 902 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 C17orf80Q9BSJ5 609 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 VN1R3Q9BXE9 311 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 VPS16Q9H269 839 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 NKX2-4Q9H2Z4 354 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 APOBEC3GQ9HC16 384 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 GCNT4Q9P109 453 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 AGAP1Q9UPQ3 857 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 PRG3Q9Y2Y8 225 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 TRANK1O15050 2925 aa7.57□□□□□ -1.2
CTDSPL2-210ENST00000560834 REV3LO60673 3130 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 PLXNA3P51805 1871 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 FSD2A1L4K1 749 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 TEX33O43247 280 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 KRT19P08727 400 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 PBX1P40424 430 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 BRCC3P46736 316 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 TAF6P49848 677 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 KLK7P49862 253 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 LILRA4P59901 499 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 NOP14P78316 857 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 RBP5P82980 135 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 APBA1Q02410 837 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 ZNF699Q32M78 642 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SV2CQ496J9 727 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SPOUT1Q5T280 376 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 FUT10Q6P4F1 479 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 TRIM65Q6PJ69 517 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SARM1Q6SZW1 724 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 CREBRFQ8IUR6 639 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 ANKRD20A12PQ8NF67 263 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 IGSF21Q96ID5 467 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 NAP1L5Q96NT1 182 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 PI4K2AQ9BTU6 479 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 HERC2P3Q9BVR0 1158 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 INTS2Q9H0H0 1204 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SIX2Q9NPC8 291 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 RAB20Q9NX57 234 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 RABGEF1Q9UJ41 708 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 ADAM28Q9UKQ2 775 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SIK3Q9Y2K2 1263 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
CTDSPL2-210ENST00000560834 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PATJQ8NI35 1801 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PTPRDP23468 1912 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 EPOPA6NHQ4 379 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 I3L4J1 428 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 M0QZQ0 153 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SOX1O00570 391 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 EPHB6O15197 1021 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PHACTR2O75167 634 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 FGF18O76093 207 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 B3GAT3O94766 335 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SERPINC1P01008 464 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TPM2P07951 284 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SLC9A1P19634 815 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 CDK11BP21127 795 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PON1P27169 355 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ATICP31939 592 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PPM1AP35813 382 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 BMPR1AP36894 532 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PNPLA4P41247 253 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ASPAP45381 313 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ERVK-21P61565 698 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 PLCB3Q01970 1234 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TRPC3Q13507 836 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TIGD5Q53EQ6 642 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 DMRTA1Q5VZB9 504 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 DCLRE1AQ6PJP8 1040 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ARHGEF19Q8IW93 802 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TAF4BQ92750 862 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TIFAQ96CG3 184 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 HPDLQ96IR7 371 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SUSD3Q96L08 255 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 SAMD11Q96NU1 681 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 ERGIC2Q96RQ1 377 aa7.55□□□□□ -1.2
CTDSPL2-210ENST00000560834 TGS1Q96RS0 853 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms