RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LMCD1Q9NZU5 365 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 SLAMF8Q9P0V8 285 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 RGS17Q9UGC6 210 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 AJAP1Q9UKB5 411 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 CA14Q9ULX7 337 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 TBX20Q9UMR3 447 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 MAGED1Q9Y5V3 778 aaPredicted RBP4.3□□□□□ -1.72
TDP1-217ENST00000557782 HS3ST4Q9Y661 456 aa4.3□□□□□ -1.72
TDP1-217ENST00000557782 F8W031 263 aaPredicted RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 H0Y858 1186 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 KCNQ3O43525 872 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 GASTP01350 101 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 HNRNPA1P09651 372 aaKnown RBP eCLIP4.29□□□□□ -1.72
TDP1-217ENST00000557782 IL2RBP14784 551 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 AKR1B1P15121 316 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 THBS2P35442 1172 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 POLD2P49005 469 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 PRKAA2P54646 552 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 NOMO3P69849 1222 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 NKX3-2P78367 333 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 IL13RA1P78552 427 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ATP8B2P98198 1209 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ROR1Q01973 937 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 PRKCQQ04759 706 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 MTM1Q13496 603 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ERV3-1Q14264 604 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 TRIM71Q2Q1W2 868 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 Q6ZNB5 142 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 CXXC5Q7LFL8 322 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 TAS1R1Q7RTX1 841 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ZC3H18Q86VM9 953 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 SLC44A2Q8IWA5 706 aaPredicted RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 CNPY4Q8N129 248 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 PCSK9Q8NBP7 692 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 CEP70Q8NHQ1 597 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 SMCR8Q8TEV9 937 aaPredicted RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 NELL1Q92832 810 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ATP6V1E2Q96A05 226 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 TSPAN17Q96FV3 270 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 CCDC120Q96HB5 630 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ZMAT2Q96NC0 199 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 ADAMTS10Q9H324 1103 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 PABPC3Q9H361 631 aaKnown RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 TNFRSF12AQ9NP84 129 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 DLL4Q9NR61 685 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 TLR9Q9NR96 1032 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 CFAP97Q9P2B7 532 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 ARHGAP20Q9P2F6 1191 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 NFKBIL1Q9UBC1 381 aaPredicted RBP4.29□□□□□ -1.72
TDP1-217ENST00000557782 TRPS1Q9UHF7 1281 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 MID2Q9UJV3 735 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 VPS28Q9UK41 221 aa4.29□□□□□ -1.72
TDP1-217ENST00000557782 TDRD9Q8NDG6 1382 aaKnown RBP4.28□□□□□ -1.72
TDP1-217ENST00000557782 TSPY2A6NKD2 308 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 GSC2O15499 205 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ADCY6O43306 1168 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 DKC1O60832 514 aaKnown RBP eCLIP4.28□□□□□ -1.72
TDP1-217ENST00000557782 USP1O94782 785 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 STARD3NLO95772 234 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ANXA1P04083 346 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 A1BGP04217 495 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 PRKCBP05771 671 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 TSPY3P0CV98 308 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 TSPY8P0CW00 308 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 GAAP10253 952 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 MTHFD1P11586 935 aaKnown RBP4.28□□□□□ -1.72
TDP1-217ENST00000557782 GYS1P13807 737 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 JUPP14923 745 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 PNLIPP16233 465 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 GUCY1A2P33402 732 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 CCR5P51681 352 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ANTXR2P58335 489 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 CD83Q01151 205 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 TSPY1Q01534 308 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 SCAPQ12770 1279 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 NFIAQ12857 509 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 CUL4AQ13619 759 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 NR1I3Q14994 352 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 PLCB4Q15147 1175 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ANKRD1Q15327 319 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 TSTQ16762 297 aaKnown RBP4.28□□□□□ -1.72
TDP1-217ENST00000557782 PABPC1LQ4VXU2 614 aaKnown RBP4.28□□□□□ -1.72
TDP1-217ENST00000557782 RALGPS1Q5JS13 557 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ZMYM1Q5SVZ6 1142 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 DCAF12L1Q5VU92 463 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 CRTC1Q6UUV9 634 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 ETV3LQ6ZN32 361 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 USP49Q70CQ1 688 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 RAB11FIP2Q7L804 512 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 PROSER1Q86XN7 944 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 TMEM57Q8N5G2 664 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 DNAJC5GQ8N7S2 189 aa4.28□□□□□ -1.72
TDP1-217ENST00000557782 BEND7Q8N7W2 519 aaPredicted RBP4.28□□□□□ -1.72
TDP1-217ENST00000557782 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms