RNA–Protein interactions for RNA: ENST00000557527.1

LINC01148-201, Transcript of long intergenic non-protein coding RNA 1148, humanhuman

TSL 1 (best) BASIC

Gene LINC01148, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01148-201ENST00000557527 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
LINC01148-201ENST00000557527 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
LINC01148-201ENST00000557527 CCDC188H7C350 402 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 RAD51CO43502 376 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 FGGP02679 453 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 TNFRSF8P28908 595 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 TNNT3P45378 269 aaPredicted RBP18.36■□□□□ 0.53
LINC01148-201ENST00000557527 LIN9Q5TKA1 542 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 PPP1R2P3Q6NXS1 205 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 PHF13Q86YI8 300 aaPredicted RBP18.36■□□□□ 0.53
LINC01148-201ENST00000557527 CXorf38Q8TB03 319 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 PXYLP1Q8TE99 480 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 SAGE1Q9NXZ1 904 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 SCN1AP35498 2009 aa18.36■□□□□ 0.53
LINC01148-201ENST00000557527 DARSP14868 501 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ELNP15502 786 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 CTNNA2P26232 953 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 POLR2BP30876 1174 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PRMT2P55345 433 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 CASP8Q14790 479 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 SLC27A1Q6PCB7 646 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 MMS22LQ6ZRQ5 1243 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 APBB1IPQ7Z5R6 666 aaPredicted RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PHLDB2Q86SQ0 1253 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ADAM22Q9P0K1 906 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 C2CD2Q9Y426 696 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 TREHO43280 583 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PGK1P00558 417 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 GLI1P08151 1106 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ITGA4P13612 1032 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 CTNNA1P35221 906 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 NKX3-2P78367 333 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 C1QBPQ07021 282 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PTP4A2Q12974 167 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 NME8Q8N427 588 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 AENQ8WTP8 325 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 TRIM7Q9C029 511 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 DDX47Q9H0S4 455 aaKnown RBP18.35■□□□□ 0.53
LINC01148-201ENST00000557527 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 PLEKHA4Q9H4M7 779 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
LINC01148-201ENST00000557527 CCDC66A2RUB6 948 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 MYADML2A6NDP7 307 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 LSM8O95777 96 aaKnown RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 HOXA11P31270 313 aaPredicted RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 ATICP31939 592 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 TRIM32Q13049 653 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 AADACL2Q6P093 401 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 PCSK9Q8NBP7 692 aaKnown RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 KIF12Q96FN5 646 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 BEGAINQ9BUH8 593 aa18.34■□□□□ 0.53
LINC01148-201ENST00000557527 EIF2AQ9BY44 585 aaKnown RBP18.34■□□□□ 0.53
LINC01148-201ENST00000557527 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.53
LINC01148-201ENST00000557527 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.53
LINC01148-201ENST00000557527 PEX5P50542 639 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 GUCY2DQ02846 1103 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 CLUL1Q15846 466 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 NT5DC4Q86YG4 428 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 CD302Q8IX05 232 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 IFT20Q8IY31 132 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 TFAP2BQ92481 460 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 SNX27Q96L92 541 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 GDF3Q9NR23 364 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 DPP3Q9NY33 737 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 AGAP1Q9UPQ3 857 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 SCINQ9Y6U3 715 aa18.33■□□□□ 0.53
LINC01148-201ENST00000557527 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
LINC01148-201ENST00000557527 EPHB4P54760 987 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 CDH8P55286 799 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 SNX17Q15036 470 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 TAF2Q6P1X5 1199 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 TMEM40Q8WWA1 233 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 HPDLQ96IR7 371 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 SLITRK6Q9H5Y7 841 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 EPB41L5Q9HCM4 733 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 SNTG2Q9NY99 539 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 PCDHGC3Q9UN70 934 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 PCDHA3Q9Y5H8 950 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 THSD7BQ9C0I4 1608 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 ESYT3A0FGR9 886 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
LINC01148-201ENST00000557527 P4HA1P13674 534 aa18.32■□□□□ 0.52
LINC01148-201ENST00000557527 MMP8P22894 467 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms