RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 APPP05067 770 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 FGRP09769 529 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 C1SP09871 688 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 KRT15P19012 456 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 ACRV1P26436 265 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 HOXA7P31268 230 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 GJA4P35212 333 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 MSX2P35548 267 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 FXR1P51114 621 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 PLS1Q14651 629 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 GPR19Q15760 415 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 NTRK3Q16288 839 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 CEP85Q6P2H3 762 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 DPP9Q86TI2 863 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 SGMS1Q86VZ5 419 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 ZNF808Q8N4W9 903 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 OSBP2Q969R2 916 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 KIF1BPQ96EK5 621 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 CDC6Q99741 560 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 BOLA2Q9H3K6 86 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 C11orf49Q9H6J7 331 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 INCENPQ9NQS7 918 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 SLC5A4Q9NY91 659 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 HOXC10Q9NYD6 342 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 CHMP5Q9NZZ3 219 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 DBNLQ9UJU6 430 aaKnown RBP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 CDC42EP3Q9UKI2 254 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 SRPK3Q9UPE1 567 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 RABGAP1Q9Y3P9 1069 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 TRAF6Q9Y4K3 522 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 CTDP1Q9Y5B0 961 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-240ENST00000556339 FLT1P17948 1338 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 ATRNL1Q5VV63 1379 aa4.63□□□□□ -1.67
ATXN3-240ENST00000556339 DOCK1Q14185 1865 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 PTPRFP10586 1907 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ZNFX1Q9P2E3 1918 aaKnown RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 A0A087X1B8 175 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 AQP7O14520 342 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 RAB11FIP3O75154 756 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 PTGS1P23219 599 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 RBM25P49756 843 aaKnown RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 PLCD1P51178 756 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 INHBCP55103 352 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 DPTQ07507 201 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TUBA3CQ13748 450 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 COG2Q14746 738 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 SEPT2Q15019 361 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 SHROOM1Q2M3G4 852 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ZSCAN25Q6NSZ9 544 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TUBA3EQ6PEY2 450 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TMED8Q6PL24 325 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 CATSPERGQ6ZRH7 1159 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 USP30Q70CQ3 517 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 GPR142Q7Z601 462 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ADGRA1Q86SQ6 560 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 PTRH1Q86Y79 214 aaKnown RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 RPAP2Q8IXW5 612 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 SLC17A8Q8NDX2 589 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ACER1Q8TDN7 264 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 DIS3LQ8TF46 1054 aaKnown RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 SOCS4Q8WXH5 440 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 FBXW5Q969U6 566 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 LBHD1Q9BQE6 289 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TRIM55Q9BYV6 548 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 C22orf23Q9BZE7 217 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ZDHHC5Q9C0B5 715 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TANGO6Q9C0B7 1094 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 SENP6Q9GZR1 1112 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 IKZF4Q9H2S9 585 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 RPAP3Q9H6T3 665 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-240ENST00000556339 TLR9Q9NR96 1032 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ZBTB40Q9NUA8 1239 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 MORF4L1Q9UBU8 362 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 GJD2Q9UKL4 321 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ZNF532Q9HCE3 1301 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 LAMB1P07942 1786 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 ATAD5Q96QE3 1844 aa4.62□□□□□ -1.67
ATXN3-240ENST00000556339 RBBP6Q7Z6E9 1792 aaKnown RBP4.61□□□□□ -1.67
ATXN3-240ENST00000556339 PHIPQ8WWQ0 1821 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 SLC15A5A6NIM6 579 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 FAM90A27PA6NNH2 459 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 CAPN14A8MX76 684 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 GSTA4O15217 222 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 PDE6AP16499 860 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 MAKP20794 623 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 IL13RA1P78552 427 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 NUCB1Q02818 461 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 GRM7Q14831 915 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 CCL14Q16627 93 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 BMP2KLQ5H9B9 411 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 FIGNQ5HY92 759 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 YOD1Q5VVQ6 348 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-240ENST00000556339 MAMDC4Q6UXC1 1216 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 FILIP1Q7Z7B0 1213 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 MCF2L2Q86YR7 1114 aa4.61□□□□□ -1.67
ATXN3-240ENST00000556339 HSCBQ8IWL3 235 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms