RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SPAG7O75391 227 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 POMCP01189 267 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SGSM1Q2NKQ1 1148 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 CCDC121Q6ZUS5 278 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 NWD2Q9ULI1 1742 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 F8VP50 259 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 RASGRF2O14827 1237 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 PAX7P23759 505 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 ARSEP51690 589 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 GTF2A2P52657 109 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 GRIK4Q16099 956 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 HYIQ5T013 277 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 FAM43BQ6ZT52 329 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 DCLK2Q8N568 766 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 RNF217Q8TC41 542 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 CXCL11O14625 94 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SCAMP3O14828 347 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 CST8O60676 142 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 CFHP08603 1231 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 GTF2BQ00403 316 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 DNERQ8NFT8 737 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 ALG3Q92685 438 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 OSBPL8Q9BZF1 889 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SMYD3Q9H7B4 428 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SMYD2Q9NRG4 433 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 INTS9Q9NV88 658 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 PCDHA2Q9Y5H9 948 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 B3GAT3O94766 335 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 HMBSP08397 361 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZSCAN5DPP0CG00 497 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 TBXAS1P24557 533 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 SARNPP82979 210 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZBED8Q8IZ13 594 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 TSEN2Q8NCE0 465 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 FAM114A2Q9NRY5 505 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 SAMD15Q9P1V8 674 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 HPCAL4Q9UM19 191 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 EXOC1LA0A1B0GW35 172 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MCF2LO15068 1137 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MED7O43513 233 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 RGS20O76081 388 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 RPSAP08865 295 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 GHRP10912 638 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 PEX19P40855 299 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 HHATQ5VTY9 493 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 EMBQ6PCB8 327 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 RHOT1Q8IXI2 618 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 CACNA1SQ13698 1873 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 TCRBV7S2A1N4TA0A589 114 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 C2CD2LO14523 706 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 SKAP2O75563 359 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 RPS6KA5O75582 802 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 SDC4P31431 198 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 RFC5P40937 340 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 CELF3Q5SZQ8 465 aaKnown RBP12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 ACAD10Q6JQN1 1059 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MPZL3Q6UWV2 235 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 LPPQ93052 612 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 MROH8Q9H579 483 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
ARHGEF40-206ENST00000555232 UBR2Q8IWV8 1755 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 CCDC188H7C350 402 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 E2F5Q15329 346 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 CCL14Q16627 93 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 XRRA1Q6P2D8 792 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 RAET1EQ8TD07 263 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 TMEM121Q9BTD3 319 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 MIF4GDA9UHW6 222 aaKnown RBP12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZBED1O96006 694 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 ELNP15502 786 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 P3H1Q32P28 736 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms