RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 VARS2Q5ST30 1063 aaKnown RBP18.69■□□□□ 0.58
CDK4-208ENST00000551706 CEP135Q66GS9 1140 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 CENPPQ6IPU0 288 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 LLGL2Q6P1M3 1020 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 PRSS55Q6UWB4 352 aaPredicted RBP18.69■□□□□ 0.58
CDK4-208ENST00000551706 DSTYKQ6XUX3 929 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 LRRC52Q8N7C0 313 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 C1orf127Q8N9H9 656 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 CCDC127Q96BQ5 260 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 CGRRF1Q99675 332 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 OXCT2Q9BYC2 517 aaPredicted RBP18.69■□□□□ 0.58
CDK4-208ENST00000551706 MTMR12Q9C0I1 747 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 KIAA1468Q9P260 1216 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 MTRRQ9UBK8 725 aa18.69■□□□□ 0.58
CDK4-208ENST00000551706 BARX2Q9UMQ3 279 aaPredicted RBP18.69■□□□□ 0.58
CDK4-208ENST00000551706 USP15Q9Y4E8 981 aaPredicted RBP18.69■□□□□ 0.58
CDK4-208ENST00000551706 PPEF2O14830 753 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 GLUD1P00367 558 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 ITGB3P05106 788 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 ODC1P11926 461 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 POLR2BP30876 1174 aaKnown RBP18.68■□□□□ 0.58
CDK4-208ENST00000551706 NBL1P41271 181 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 AP3M2P53677 418 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 RBP5P82980 135 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 ANKRD54Q6NXT1 300 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 TMEM130Q8N3G9 435 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 CSGALNACT2Q8N6G5 542 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 DHTKD1Q96HY7 919 aaPredicted RBP18.68■□□□□ 0.58
CDK4-208ENST00000551706 DSEQ9UL01 958 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 AGAP1Q9UPQ3 857 aa18.68■□□□□ 0.58
CDK4-208ENST00000551706 CETN3O15182 167 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 EPCAMP16422 314 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 TYMPP19971 482 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 PSMC2P35998 433 aaKnown RBP18.67■□□□□ 0.58
CDK4-208ENST00000551706 RBM10P98175 930 aaKnown RBP18.67■□□□□ 0.58
CDK4-208ENST00000551706 YWHAHQ04917 246 aaPredicted RBP18.67■□□□□ 0.58
CDK4-208ENST00000551706 ENPEPQ07075 957 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 ADAM9Q13443 819 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 MRPL58Q14197 206 aaKnown RBP18.67■□□□□ 0.58
CDK4-208ENST00000551706 PTPN21Q16825 1174 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 ZNF280DQ6N043 979 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 INTS8Q75QN2 995 aaKnown RBP18.67■□□□□ 0.58
CDK4-208ENST00000551706 OR5B17Q8NGF7 314 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 HDAC7Q8WUI4 952 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 SENP8Q96LD8 212 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 CLSTN3Q9BQT9 956 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 NUP62CLQ9H1M0 184 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 VPS13AQ96RL7 3174 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 ANK1P16157 1881 aa18.67■□□□□ 0.58
CDK4-208ENST00000551706 KPNA7A9QM74 516 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 BIN1O00499 593 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 SPTLC1O15269 473 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 OAZ2O95190 189 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 PDGFBP01127 241 aaPredicted RBP18.66■□□□□ 0.58
CDK4-208ENST00000551706 KRT19P08727 400 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 RPL17P18621 184 aaKnown RBP18.66■□□□□ 0.58
CDK4-208ENST00000551706 CCNE1P24864 410 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 CASP4P49662 377 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 CLDN10P78369 228 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 FKBP3Q00688 224 aaKnown RBP18.66■□□□□ 0.58
CDK4-208ENST00000551706 MYO1EQ12965 1108 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 RAB33AQ14088 237 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 LMBRD2Q68DH5 695 aaPredicted RBP18.66■□□□□ 0.58
CDK4-208ENST00000551706 FOXR2Q6PJQ5 311 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 RIPOR3Q96MK2 946 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 PLEKHA4Q9H4M7 779 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 PTPRJQ12913 1337 aa18.66■□□□□ 0.58
CDK4-208ENST00000551706 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 IKBKBO14920 756 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 TGM5O43548 720 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 AKAP3O75969 853 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 MBD3O95983 291 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 CYP11A1P05108 521 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 KRT13P13646 458 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 OR1D2P34982 312 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 ITIH3Q06033 890 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 CTXN3Q4LDR2 81 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 SLC8B1Q6J4K2 584 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 LILRA6Q6PI73 481 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 METTL23Q86XA0 190 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 PALB2Q86YC2 1186 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 GLYCTKQ8IVS8 523 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 FAM186BQ8IYM0 893 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 CXorf38Q8TB03 319 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 SFXN1Q9H9B4 322 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 SIX4Q9UIU6 781 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 CDY1Q9Y6F8 540 aa18.65■□□□□ 0.58
CDK4-208ENST00000551706 LRRIQ3A6PVS8 624 aaPredicted RBP18.64■□□□□ 0.57
CDK4-208ENST00000551706 CYB561D2O14569 222 aa18.64■□□□□ 0.57
CDK4-208ENST00000551706 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
CDK4-208ENST00000551706 EPB41P11171 864 aaKnown RBP18.64■□□□□ 0.57
CDK4-208ENST00000551706 BMP6P22004 513 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms