RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 BRDTQ58F21 947 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 UBAP2Q5T6F2 1119 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 GKAP1Q5VSY0 366 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 METTL7BQ6UX53 244 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 SYDE1Q6ZW31 735 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TRMT10CQ7L0Y3 403 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TAX1BP1Q86VP1 789 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CCDC105Q8IYK2 499 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CACNA2D3Q8IZS8 1091 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 GPD1LQ8N335 351 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MDM1Q8TC05 714 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 POP1Q99575 1024 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 KIFC3Q9BVG8 833 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ROPN1BQ9BZX4 212 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ROPN1Q9HAT0 212 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 VTA1Q9NP79 307 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TOPORSQ9NS56 1045 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ADGRA3Q8IWK6 1321 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 RGS16O15492 202 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 RASSF9O75901 435 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MYBL1P10243 752 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CHN1P15882 459 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 HOXD10P28358 340 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 SLC1A1P43005 524 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 PTP4A2Q12974 167 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 FAM47CQ5HY64 1035 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CCDC62Q6P9F0 684 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 OTUD6AQ7L8S5 288 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CCDC13Q8IYE1 715 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 LRRC71Q8N4P6 559 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 DHX38Q92620 1227 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TMEM143Q96AN5 459 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 GPR20Q99678 358 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 STMN4Q9H169 189 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ARHGAP28Q9P2N2 729 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 PLXNA1Q9UIW2 1896 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MROH7Q68CQ1 1323 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ASAP2O43150 1006 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 STAM2O75886 525 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 GJB1P08034 283 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ZNF865P0CJ78 1059 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 IVDP26440 423 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ABCD1P33897 745 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MAN1A1P33908 653 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 IFI35P80217 286 aaPredicted RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ARHGAP1Q07960 439 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TMEM62Q0P6H9 643 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 AUHQ13825 339 aaKnown RBP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ANKRD20A8PQ5CZ79 823 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 ABHD15Q6UXT9 468 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CCDC121Q6ZUS5 278 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TAS1R3Q7RTX0 852 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MCOLN2Q8IZK6 566 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 MAIP1Q8WWC4 291 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 TRIM11Q96F44 468 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 PCYT2Q99447 389 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 RNPEPQ9H4A4 650 aa8.62□□□□□ -1.03
RAB3IP-215ENST00000551641 CLDN3O15551 220 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 DKC1O60832 514 aaKnown RBP eCLIP8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 DGAT1O75907 488 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 CYP1A1P04798 512 aaPredicted RBP8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 INHAP05111 366 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 GHRP10912 638 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 ITIH2P19823 946 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 ATP4AP20648 1035 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 FGFR4P22455 802 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 KCNJ1P48048 391 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 CENPCQ03188 943 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 PTK6Q13882 451 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 RNF187Q5TA31 235 aaPredicted RBP8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 CXCL17Q6UXB2 119 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 PIGWQ7Z7B1 504 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 MCPH1Q8NEM0 835 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 POMGNT1Q8WZA1 660 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 CCT6BQ92526 530 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 USP6NLQ92738 828 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 ATP6V0A1Q93050 837 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 KATNBL1Q9H079 304 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 KIAA1586Q9HCI6 787 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 XPNPEP1Q9NQW7 623 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 NEU2Q9Y3R4 380 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 PCDHB2Q9Y5E7 798 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 STYXL1Q9Y6J8 313 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 ARID2Q68CP9 1835 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 NFASCO94856 1347 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 DNM1LO00429 736 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 RASGRF2O14827 1237 aa8.61□□□□□ -1.03
RAB3IP-215ENST00000551641 TGFB3P10600 412 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms