RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CACNB3P54284 484 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 EPHA5P54756 1037 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 PPP2R2AP63151 447 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 IL13RA1P78552 427 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 DBPQ10586 325 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TCF15Q12870 199 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 PABPC4Q13310 644 aaKnown RBP eCLIP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 PPIGQ13427 754 aaKnown RBP eCLIP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 UBE4AQ14139 1066 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 LRRC41Q15345 812 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 CCL14Q16627 93 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 LEXMQ3ZCV2 418 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 HERC4Q5GLZ8 1057 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 MFSD14CQ5VZR4 134 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 FBXO42Q6P3S6 717 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 LRRC55Q6ZSA7 311 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 KCTD1Q719H9 257 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 CXXC5Q7LFL8 322 aaKnown RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 GPR142Q7Z601 462 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 GSPT2Q8IYD1 628 aaKnown RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TRPV1Q8NER1 839 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 PPM1EQ8WY54 764 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 FAM84BQ96KN1 310 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 CCDC140Q96MF4 163 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TINF2Q9BSI4 451 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 IDI2Q9BXS1 227 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 GPR87Q9BY21 358 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 SLC28A3Q9HAS3 691 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TXNRD2Q9NNW7 524 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TMOD2Q9NZR1 351 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 FLRT1Q9NZU1 646 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 RNF7Q9UBF6 113 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TESQ9UGI8 421 aaKnown RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 TRPS1Q9UHF7 1281 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 MSRAQ9UJ68 235 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 STRIP2Q9ULQ0 834 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 FRMD4BQ9Y2L6 1034 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 HS3ST4Q9Y661 456 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 RIF1Q5UIP0 2472 aaKnown RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
PTCH1-223ENST00000551623 CACNA1GO43497 2377 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 MAST4O15021 2626 aa2.88□□□□□ -1.95
PTCH1-223ENST00000551623 DLG5Q8TDM6 1919 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 CFAP47Q6ZTR5 3102 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 TPRP12270 2363 aaKnown RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 UNC79Q9P2D8 2635 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 TCRBV5S4A2TA0A5A2 114 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 BLACEA4D250 179 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MYADML2A6NDP7 307 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SLC15A5A6NIM6 579 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 GRXCR1A8MXD5 290 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SNAP23O00161 211 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 NKRFO15226 690 aaKnown RBP eCLIP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 LPXNO60711 386 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 PPFIA4O75335 1185 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 HSPA5P11021 654 aaKnown RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 COL6A2P12110 1019 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 CYP2B6P20813 491 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 NBL1P41271 181 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 ADCYAP1R1P41586 468 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 CDK7P50613 346 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 HERVK_113P62684 666 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SPIRE1Q08AE8 756 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 GRB14Q14449 540 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 CCSAPQ6IQ19 270 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 KCNT2Q6UVM3 1135 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 GADL1Q6ZQY3 521 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MIGA2Q7L4E1 593 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 OTOP2Q7RTS6 562 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MCF2L2Q86YR7 1114 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SLC44A5Q8NCS7 719 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 GPRC5AQ8NFJ5 357 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 NEK9Q8TD19 979 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SH3RF2Q8TEC5 729 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 HNRNPLLQ8WVV9 542 aaKnown RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 SMG7Q92540 1137 aaKnown RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 NELL1Q92832 810 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MPHOSPH8Q99549 860 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 OSBPL5Q9H0X9 879 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 PORCNQ9H237 461 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MTIF3Q9H2K0 278 aaKnown RBP2.87□□□□□ -1.95
PTCH1-223ENST00000551623 RSAD1Q9HA92 442 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 DSEQ9UL01 958 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 FAM184BQ9ULE4 1060 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 DOCK1Q14185 1865 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 MROH7Q68CQ1 1323 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 GPR179Q6PRD1 2367 aa2.87□□□□□ -1.95
PTCH1-223ENST00000551623 DOCK3Q8IZD9 2030 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 FAM186AA6NE01 2351 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 MYH3P11055 1940 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 FAM208BQ5VWN6 2430 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 A0A0G2JNJ9 132 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 PRR23AA6NEV1 266 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 TRIM75PA6NK02 468 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 ZNF185O15231 689 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 STRNO43815 780 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 DDAH1O94760 285 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 GNAT1P11488 350 aa2.86□□□□□ -1.95
PTCH1-223ENST00000551623 CSF2RAP15509 400 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms