RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 KRT10P13645 584 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 DRD1P21728 446 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 CIITAP33076 1130 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 EIF2S3P41091 472 aaKnown RBP7.49□□□□□ -1.21
LIN7A-202ENST00000549417 MCM2P49736 904 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 CDR1P51861 262 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 EMP3P54852 163 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 CYP4F8P98187 520 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 RUNX3Q13761 415 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 C2orf27AQ580R0 203 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 LYSMD4Q5XG99 296 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PCSK4Q6UW60 755 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 RNF19BQ6ZMZ0 732 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 GAREM2Q75VX8 874 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 C11orf74Q86VG3 221 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 NOSTRINQ8IVI9 506 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 NAXDQ8IW45 347 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 REXO1Q8N1G1 1221 aaKnown RBP7.49□□□□□ -1.21
LIN7A-202ENST00000549417 CCDC33Q8N5R6 958 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 ASAP3Q8TDY4 903 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 MARVELD3Q96A59 401 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 ACDQ96AP0 544 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PGLYRP2Q96PD5 576 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 P2RY13Q9BPV8 354 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 GLT8D2Q9H1C3 349 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 THG1LQ9NWX6 298 aaKnown RBP7.49□□□□□ -1.21
LIN7A-202ENST00000549417 WRAP73Q9P2S5 460 aaPredicted RBP7.49□□□□□ -1.21
LIN7A-202ENST00000549417 DKK4Q9UBT3 224 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 FBXL5Q9UKA1 691 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 RCAN3Q9UKA8 241 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PILRBQ9UKJ0 227 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 APOBEC2Q9Y235 224 aaKnown RBP7.49□□□□□ -1.21
LIN7A-202ENST00000549417 USP20Q9Y2K6 914 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PCDH15Q96QU1 1955 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 PTPN13Q12923 2485 aa7.49□□□□□ -1.21
LIN7A-202ENST00000549417 RELNP78509 3460 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 A0A1B0GUA9 196 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CCER2I3L3R5 266 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 EML1O00423 815 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 ZBTB39O15060 712 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 ASAP2O43150 1006 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 TRAPPC3O43617 180 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 SOAT2O75908 522 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CPB1P15086 417 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 PSMC5P62195 406 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CAPSQ13938 189 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 HNRNPDQ14103 355 aaKnown RBP7.48□□□□□ -1.21
LIN7A-202ENST00000549417 PTPAQ15257 358 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 UPP1Q16831 310 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CTXN3Q4LDR2 81 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CCDC157Q569K6 752 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 B4GALNT3Q6L9W6 998 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 TMPRSS7Q7RTY8 843 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 LEMD2Q8NC56 503 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 TTC16Q8NEE8 873 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 RDM1Q8NG50 284 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 TCP11Q8WWU5 503 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 MTRQ99707 1265 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 FAM83CQ9BQN1 747 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 SLC6A14Q9UN76 642 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 CCL26Q9Y258 94 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 YIPF1Q9Y548 306 aa7.48□□□□□ -1.21
LIN7A-202ENST00000549417 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
LIN7A-202ENST00000549417 TMEM189-UBE2V1I3L0A0 370 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 ARHGAP33O14559 1287 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 VNN2O95498 520 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SERPINF2P08697 491 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 OR4Q2P0C623 313 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 HNRNPLP14866 589 aaKnown RBP eCLIP7.47□□□□□ -1.212e-6■■■□□ 18.2
LIN7A-202ENST00000549417 GABRR2P28476 465 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 MCM5P33992 734 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 GJA4P35212 333 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 RFC5P40937 340 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 P2RY2P41231 377 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 EPHB3P54753 998 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SOX4Q06945 474 aaPredicted RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 FUT2Q10981 343 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 TFDP1Q14186 410 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 NBR1Q14596 966 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 PCBP1Q15365 356 aaKnown RBP eCLIP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 DUOXA1Q1HG43 343 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 FBXO43Q4G163 708 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 TAF1BQ53T94 588 aaPredicted RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 XKR9Q5GH70 373 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 TPGS2Q68CL5 300 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 B3GNT9Q6UX72 402 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 RASSF3Q86WH2 238 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 TMTC2Q8N394 836 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 LSM14AQ8ND56 463 aaKnown RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SETD7Q8WTS6 366 aaKnown RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 CNOT6LQ96LI5 555 aaKnown RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 PNMA5Q96PV4 448 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms