RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.44
VDR-206ENST00000549336 C2CD2Q9Y426 696 aa12.33□□□□□ -0.44
VDR-206ENST00000549336 PCDHB5Q9Y5E4 795 aa12.33□□□□□ -0.44
VDR-206ENST00000549336 CHD4Q14839 1912 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 A6NNZ2 444 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 NCKAP1LP55160 1127 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 MTA1Q13330 715 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TUBB8Q3ZCM7 444 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 ITPRIPL1Q6GPH6 555 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CCT6BQ92526 530 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 DPH5Q9H2P9 285 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TJP1Q07157 1748 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 A0A087X0B3 334 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 MX2P20592 715 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CDR2Q01850 454 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 DEUP1Q05D60 604 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 PTK7Q13308 1070 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 IRF5Q13568 498 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 NOMO2Q5JPE7 1267 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CDKAL1Q5VV42 579 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 GANCQ8TET4 914 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 ACO2Q99798 780 aaKnown RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 TRIM7Q9C029 511 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CISHQ9NSE2 258 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 RNF186Q9NXI6 227 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 STK39Q9UEW8 545 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TMEM253P0C7T8 217 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 GALCP54803 685 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CDH6P55285 790 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 UGCGQ16739 394 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 CDKL3Q8IVW4 592 aaPredicted RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 KIAA0319LQ8IZA0 1049 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 KLHL8Q9P2G9 620 aaPredicted RBP12.32□□□□□ -0.44
VDR-206ENST00000549336 IRS2Q9Y4H2 1338 aa12.32□□□□□ -0.44
VDR-206ENST00000549336 PPP1R12AO14974 1030 aaPredicted RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 FGGP02679 453 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 TPI1P60174 286 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 BASP1P80723 227 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 FIBCD1Q8N539 461 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 RSPH1Q8WYR4 309 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 TSEN34Q9BSV6 310 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 GTF3C4Q9UKN8 822 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 ZNF536O15090 1300 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 GZMAP12544 262 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 CD52P31358 61 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 GRM5P41594 1212 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 ACLYP53396 1101 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 ACOT1Q86TX2 421 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 CPA5Q8WXQ8 436 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 MMTAG2Q9BU76 263 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 CDT1Q9H211 546 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 SP110Q9HB58 689 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 CAND2O75155 1236 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 CPP00450 1065 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 SPON2Q9BUD6 331 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 PEX10O60683 326 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 FXR1P51114 621 aaKnown RBP eCLIP12.31□□□□□ -0.44
VDR-206ENST00000549336 KPNA1P52294 538 aaPredicted RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 LRRC8DQ7L1W4 858 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 FBXO44Q9H4M3 255 aa12.31□□□□□ -0.44
VDR-206ENST00000549336 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
VDR-206ENST00000549336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
VDR-206ENST00000549336 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.44
VDR-206ENST00000549336 MYH2Q9UKX2 1941 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 CRCPO75575 148 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
VDR-206ENST00000549336 ST8SIA6P61647 398 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 YWHAGP61981 247 aaKnown RBP eCLIP12.3□□□□□ -0.44
VDR-206ENST00000549336 GRIK3Q13003 919 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 SNX1Q13596 522 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 COBLL1Q53SF7 1204 aa12.3□□□□□ -0.44
VDR-206ENST00000549336 HEATR6Q6AI08 1181 aaKnown RBP12.3□□□□□ -0.44
VDR-206ENST00000549336 FAM43BQ6ZT52 329 aaPredicted RBP12.3□□□□□ -0.44
VDR-206ENST00000549336 SLC24A5Q71RS6 500 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms