RNA–Protein interactions for RNA: ENST00000549042.1

MBD6-208, Transcript of methyl-CpG binding domain protein 6, human

TSL 4

Gene MBD6, Length 533 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD6-208	ENST00000549042	SMG9	Q9H0W8	520 aa	Known RBP	11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	ATXN3L	Q9H3M9	355 aa		11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	AFF4	Q9UHB7	1163 aa	Known RBP	11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	DNMT3L	Q9UJW3	386 aa		11.19	□□□□□ -0.62
MBD6-208	ENST00000549042		V9GY48	417 aa	Predicted RBP	11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	DOPEY2	Q9Y3R5	2298 aa		11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	MGA	Q8IWI9	3026 aa		11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	COL5A1	P20908	1838 aa	Predicted RBP	11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	TSC2	P49815	1807 aa		11.19	□□□□□ -0.62
MBD6-208	ENST00000549042	ATM	Q13315	3056 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042		A0A1B0GUA9	196 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042		H7C4K7	107 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	SH2B2	O14492	632 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	PRC1	O43663	620 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	PSMD10	O75832	226 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	ARSA	P15289	507 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	CTXN3	Q4LDR2	81 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	TAF1B	Q53T94	588 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	GAREM2	Q75VX8	874 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	REXO1	Q8N1G1	1221 aa	Known RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	TMTC2	Q8N394	836 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	PDCD7	Q8N8D1	485 aa	Known RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	CCDC136	Q96JN2	1154 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	DNAJC25	Q9H1X3	360 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	GOLGA2P5	Q9HBQ8	144 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD6-208	ENST00000549042	SLC12A7	Q9Y666	1083 aa		11.18	□□□□□ -0.62
MBD6-208	ENST00000549042		B8ZZF3	427 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	CBFA2T3	O75081	653 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	GJB3	O75712	270 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	SYP	P08247	313 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	EIF2S3	P41091	472 aa	Known RBP	11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	TFDP1	Q14186	410 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	NBR1	Q14596	966 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	UPP1	Q16831	310 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	ARHGAP15	Q53QZ3	475 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	GLRA4	Q5JXX5	417 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	RNF19B	Q6ZMZ0	732 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	GALNT15	Q8N3T1	639 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	EXOC4	Q96A65	974 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	KIF2C	Q99661	725 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	MAFF	Q9ULX9	164 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	NOTCH2	Q04721	2471 aa		11.17	□□□□□ -0.62
MBD6-208	ENST00000549042	HELZ	P42694	1942 aa	Known RBP	11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	CEP192	Q8TEP8	1941 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	SLC28A2	O43868	658 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	ALDH1A2	O94788	518 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	CPB1	P15086	417 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	GABRR2	P28476	465 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	EPHB3	P54753	998 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	SEC13	P55735	322 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	PTH1R	Q03431	593 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	CAPS	Q13938	189 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	MXD4	Q14582	209 aa	Predicted RBP	11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	C2orf27A	Q580R0	203 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	COLEC12	Q5KU26	742 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	SPDYC	Q5MJ68	293 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	B3GNT9	Q6UX72	402 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	RABEPK	Q7Z6M1	372 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	FMNL3	Q8IVF7	1028 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	CCDC33	Q8N5R6	958 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	DEFB119	Q8N690	84 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	ASAP3	Q8TDY4	903 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	WHAMM	Q8TF30	809 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	SETD7	Q8WTS6	366 aa	Known RBP	11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	CD101	Q93033	1021 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	UROC1	Q96N76	676 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	MTR	Q99707	1265 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	TASP1	Q9H6P5	420 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	PCOLCE2	Q9UKZ9	415 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	TBX20	Q9UMR3	447 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	PPME1	Q9Y570	386 aa		11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	UBR5	O95071	2799 aa	Predicted RBP	11.16	□□□□□ -0.62
MBD6-208	ENST00000549042	PLXND1	Q9Y4D7	1925 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	GOLGA8CP	A6NN73	597 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	ERVH48-1	M5A8F1	160 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	SYN3	O14994	580 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	RRP8	O43159	456 aa	Known RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	TLX3	O43711	291 aa	Predicted RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	EDIL3	O43854	480 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	ATXN1L	P0C7T5	689 aa	Known RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	WEE1	P30291	646 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	GJA4	P35212	333 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	QARS	P47897	775 aa	Known RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	CSRP3	P50461	194 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	CYP4F8	P98187	520 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	FUT2	Q10981	343 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	PLD1	Q13393	1074 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	MRPL58	Q14197	206 aa	Known RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	CRY1	Q16526	586 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	MAP7D1	Q3KQU3	841 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	USP33	Q8TEY7	942 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	TMEM87B	Q96K49	555 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	TBC1D32	Q96NH3	1257 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	PPP1R10	Q96QC0	940 aa	Known RBP	11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	MTA3	Q9BTC8	594 aa		11.15	□□□□□ -0.62
MBD6-208	ENST00000549042	SEMA4C	Q9C0C4	833 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms