RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 EP400Q96L91 3159 aa24.42■■□□□ 1.5
NPAS3-206ENST00000548645 GSC2O15499 205 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MAP3K13O43283 966 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 ZBED4O75132 1171 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 TAS2R40P59535 323 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MORF4L2Q15014 288 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MAPK6Q16659 721 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 OGFOD1Q8N543 542 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 PPFIBP2Q8ND30 876 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 RNF217Q8TC41 542 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 RIT2Q99578 217 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 PIDD1Q9HB75 910 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 ZNF148Q9UQR1 794 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 GYG2O15488 501 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 GDF11O95390 407 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 CCDC142Q17RM4 750 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
NPAS3-206ENST00000548645 CENPUQ71F23 418 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MIER3Q7Z3K6 550 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 ZNF677Q86XU0 584 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 ZBED8Q8IZ13 594 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 NSL1Q96IY1 281 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 TRAPPC9Q96Q05 1148 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 FHDC1Q9C0D6 1143 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-206ENST00000548645 LIASO43766 372 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 VIL1P09327 827 aaKnown RBP24.41■■□□□ 1.5
NPAS3-206ENST00000548645 CD58P19256 250 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 ARSEP51690 589 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 LIN9Q5TKA1 542 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 RNF220Q5VTB9 566 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 LRRC74BQ6ZQY2 392 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MCUR1Q96AQ8 359 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 TRIM55Q9BYV6 548 aa24.41■■□□□ 1.5
NPAS3-206ENST00000548645 MYPNQ86TC9 1320 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 CFAP69A5D8W1 941 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 ATP9AO75110 1047 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 SSR1P43307 286 aaKnown RBP24.4■■□□□ 1.5
NPAS3-206ENST00000548645 GCNT1Q02742 428 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 GPS1Q13098 491 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 ACSBG2Q5FVE4 666 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 MTHFD1LQ6UB35 978 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 STMN2Q93045 179 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 PTCD3Q96EY7 689 aaKnown RBP24.4■■□□□ 1.5
NPAS3-206ENST00000548645 SYNCQ9H7C4 482 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 EXOC7Q9UPT5 735 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 DDX39AO00148 427 aaKnown RBP24.4■■□□□ 1.5
NPAS3-206ENST00000548645 NDC80O14777 642 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 CAPN9O14815 690 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 SLC16A4O15374 487 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 CALCAP01258 141 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 P4HBP07237 508 aaKnown RBP24.4■■□□□ 1.5
NPAS3-206ENST00000548645 GJC1P36383 396 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 LLGL2Q6P1M3 1020 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 CCDC174Q6PII3 467 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 VPS52Q8N1B4 723 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 IFT43Q96FT9 208 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 ARL8BQ9NVJ2 186 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 KANSL3Q9P2N6 904 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 HEY2Q9UBP5 337 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 NUMBLQ9Y6R0 609 aa24.4■■□□□ 1.5
NPAS3-206ENST00000548645 KRT36O76013 467 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 PSMG1O95456 288 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 CACNB3P54284 484 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 GEMIN4P57678 1058 aaKnown RBP24.39■■□□□ 1.5
NPAS3-206ENST00000548645 KPNB1Q14974 876 aaKnown RBP24.39■■□□□ 1.5
NPAS3-206ENST00000548645 EAPPQ56P03 285 aaPredicted RBP24.39■■□□□ 1.5
NPAS3-206ENST00000548645 USP37Q86T82 979 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 GLIS1Q8NBF1 620 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 RFWD2Q8NHY2 731 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 TMC2Q8TDI7 906 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 NRG4Q8WWG1 115 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 MRPL47Q9HD33 250 aaKnown RBP24.39■■□□□ 1.5
NPAS3-206ENST00000548645 DNPEPQ9ULA0 475 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 PCDHB2Q9Y5E7 798 aa24.39■■□□□ 1.5
NPAS3-206ENST00000548645 RTN3O95197 1032 aaPredicted RBP24.39■■□□□ 1.49
NPAS3-206ENST00000548645 ADRA1DP25100 572 aa24.39■■□□□ 1.49
NPAS3-206ENST00000548645 GTF2H1P32780 548 aa24.39■■□□□ 1.49
NPAS3-206ENST00000548645 RARRES1P49788 294 aa24.39■■□□□ 1.49
NPAS3-206ENST00000548645 ZC3H12AQ5D1E8 599 aaKnown RBP24.39■■□□□ 1.49
NPAS3-206ENST00000548645 EFHC2Q5JST6 749 aa24.39■■□□□ 1.49
NPAS3-206ENST00000548645 DRICH1Q6PGQ1 229 aaPredicted RBP24.39■■□□□ 1.49
NPAS3-206ENST00000548645 ZC3H18Q86VM9 953 aaKnown RBP24.39■■□□□ 1.49
NPAS3-206ENST00000548645 ZC3H12CQ9C0D7 883 aaKnown RBP24.39■■□□□ 1.49
NPAS3-206ENST00000548645 A0A0G2JND7 137 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 CRKP46108 304 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 STAT2P52630 851 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 NFX1Q12986 1120 aaKnown RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 C2CD6Q53TS8 623 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 PPP1R15BQ5SWA1 713 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 TRIM4Q9C037 500 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 TOPORSQ9NS56 1045 aaPredicted RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 STX18Q9P2W9 335 aaKnown RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 USTQ9Y2C2 406 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 WDR91A4D1P6 747 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 ZSCAN5DPP0CG00 497 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 HOXA10P31260 410 aaPredicted RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 PEX3P56589 373 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 OVGP1Q12889 678 aa24.38■■□□□ 1.49
NPAS3-206ENST00000548645 PDIA2Q13087 525 aaKnown RBP24.38■■□□□ 1.49
NPAS3-206ENST00000548645 ALLCQ8N6M5 410 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms