RNA–Protein interactions for RNA: ENST00000547955.5

TPCN1-210, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-210ENST00000547955 SPG21Q9NZD8 308 aa11.98□□□□□ -0.49
TPCN1-210ENST00000547955 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
TPCN1-210ENST00000547955 TIMM13Q9Y5L4 95 aaPredicted RBP11.98□□□□□ -0.49
TPCN1-210ENST00000547955 SF3B1O75533 1304 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■■■■ 137.9
TPCN1-210ENST00000547955 ITIH6Q6UXX5 1313 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 TRAPPC3O43617 180 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 HUS1O60921 280 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 NOL4O94818 638 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 CSPG5O95196 566 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 WEE2P0C1S8 567 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 ODC1P11926 461 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 UCHL3P15374 230 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 TBXAS1P24557 533 aaPredicted RBP11.97□□□□□ -0.49
TPCN1-210ENST00000547955 PPM1AP35813 382 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 ASPAP45381 313 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 CUL2Q13617 745 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 RAB30Q15771 203 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 FAM171A1Q5VUB5 890 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 SPECC1LQ69YQ0 1117 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 CACNA2D4Q7Z3S7 1137 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 KLHL23Q8NBE8 558 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 APPL2Q8NEU8 664 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 B3GALT6Q96L58 329 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 SDCBP2Q9H190 292 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 GDAP2Q9NXN4 497 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 DNAJC12Q9UKB3 198 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 L1RE1Q9UN81 338 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 CHD9Q3L8U1 2897 aa11.97□□□□□ -0.49
TPCN1-210ENST00000547955 RANBP2P49792 3224 aaKnown RBP11.97□□□□□ -0.49
TPCN1-210ENST00000547955 M0QZQ0 153 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 FGF18O76093 207 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.49
TPCN1-210ENST00000547955 DNAJB2P25686 324 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 TKTP29401 623 aaKnown RBP11.96□□□□□ -0.49
TPCN1-210ENST00000547955 BMPR1AP36894 532 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.49
TPCN1-210ENST00000547955 MFAP3P55082 362 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 TAP1Q03518 808 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 SOWAHAQ2M3V2 549 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 WSCD1Q658N2 575 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 TAS1R1Q7RTX1 841 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 ADGRF2Q8IZF7 708 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 TOP6BLQ8N6T0 577 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 SPC24Q8NBT2 197 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 KREMEN1Q96MU8 473 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 MRPL45Q9BRJ2 306 aaKnown RBP11.96□□□□□ -0.49
TPCN1-210ENST00000547955 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 BCO2Q9BYV7 579 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 SNX25Q9H3E2 840 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 RWDD3Q9Y3V2 267 aa11.96□□□□□ -0.49
TPCN1-210ENST00000547955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.96□□□□□ -0.493e-6■■□□□ 11.7
TPCN1-210ENST00000547955 PTPRDP23468 1912 aa11.96□□□□□ -0.5
TPCN1-210ENST00000547955 PLXNA3P51805 1871 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CARNS1A5YM72 827 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 C2CD2LO14523 706 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 HCRTO43612 131 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 GYPCP04921 128 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 KRT5P13647 590 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CDC25BP30305 580 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CA8P35219 290 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 USP8P40818 1118 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 GCNT1Q02742 428 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 KRT17Q04695 432 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 GOLGA8FQ08AF8 430 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 GOLGA8DPQ0D2H9 430 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ORC1Q13415 861 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 DRAP1Q14919 205 aaPredicted RBP11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 PPFIBP1Q86W92 1011 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 OSTM1Q86WC4 334 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 METTL23Q86XA0 190 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 OR6B3Q8NGW1 331 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 KBTBD7Q8WVZ9 684 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
TPCN1-210ENST00000547955 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 TGS1Q96RS0 853 aaKnown RBP11.95□□□□□ -0.5
TPCN1-210ENST00000547955 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ALG13Q9NP73 1137 aaKnown RBP11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CISHQ9NSE2 258 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CEP72Q9P209 647 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 CHD7Q9P2D1 2997 aa11.95□□□□□ -0.5
TPCN1-210ENST00000547955 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 A8MXQ7 604 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
TPCN1-210ENST00000547955 SOD2P04179 222 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 TPM1P09493 284 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 RFX1P22670 979 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 PAX3P23760 479 aa11.94□□□□□ -0.5
TPCN1-210ENST00000547955 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms