RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 HOOK1Q9UJC3 728 aaKnown RBP12.75□□□□□ -0.37
RAB5C-204ENST00000547517 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
RAB5C-204ENST00000547517 MTCL1Q9Y4B5 1905 aaKnown RBP12.75□□□□□ -0.37
RAB5C-204ENST00000547517 OR6C75A6NL08 312 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 PDXKO00764 312 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CALUO43852 315 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 PRPF40AO75400 957 aaKnown RBP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 SMC2O95347 1197 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CYP11A1P05108 521 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 HNRNPA1P09651 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 HOXA9P31269 272 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CASP4P49662 377 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 RBP5P82980 135 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 DUOXA2Q1HG44 320 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 RNF19BQ6ZMZ0 732 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 GET4Q7L5D6 327 aaPredicted RBP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 GUF1Q8N442 669 aaKnown RBP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 LRRC52Q8N7C0 313 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 ZNF461Q8TAF7 563 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 TMEM209Q96SK2 561 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 RHOBTB2Q9BYZ6 727 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 WDR6Q9NNW5 1121 aaKnown RBP12.74□□□□□ -0.37
RAB5C-204ENST00000547517 DSEQ9UL01 958 aa12.74□□□□□ -0.37
RAB5C-204ENST00000547517 NCOR1O75376 2440 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 DCXO43602 365 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 XYLBO75191 536 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 ABLIM3O94929 683 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 PAPLNO95428 1278 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 SEC24AO95486 1093 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 LRG1P02750 347 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 ATF2P15336 505 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 NR2F2P24468 414 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 PLA2G5P39877 138 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 NTHL1P78549 312 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 TRAPPC11Q7Z392 1133 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 GRASPQ7Z6J2 395 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-204ENST00000547517 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 FAM122AQ96E09 287 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 MFSD14AQ96MC6 490 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 OXCT2Q9BYC2 517 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-204ENST00000547517 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
RAB5C-204ENST00000547517 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 DMAC2Q9NW81 257 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 AFF4Q9UHB7 1163 aaKnown RBP12.73□□□□□ -0.37
RAB5C-204ENST00000547517 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 PCDHA5Q9Y5H7 936 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 SNX9Q9Y5X1 595 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
RAB5C-204ENST00000547517 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-204ENST00000547517 HUS1O60921 280 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 CLSTN1O94985 981 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-204ENST00000547517 CDR1P51861 262 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 UBE2HP62256 183 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 BIRC3Q13489 604 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 MYBPC2Q14324 1141 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 ZNF658Q5TYW1 1059 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-204ENST00000547517 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
RAB5C-204ENST00000547517 HPDLQ96IR7 371 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 RTP3Q9BQQ7 232 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 HCFC1R1Q9NWW0 138 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 USTQ9Y2C2 406 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
RAB5C-204ENST00000547517 MTMR11A4FU01 709 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 PI4K2BG5E9Z4 385 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 N4BP1O75113 896 aaKnown RBP12.71□□□□□ -0.37
RAB5C-204ENST00000547517 VNN2O95498 520 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ASGR2P07307 311 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 POU2F2P09086 479 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ALADP13716 330 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 FSHRP23945 695 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 PRCPP42785 496 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 DLG4P78352 724 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 TWF1Q12792 350 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 GPR17Q13304 367 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.37
RAB5C-204ENST00000547517 ISM2Q6H9L7 571 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms