RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TUBGCP4Q9UGJ1 667 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 CHORDC1Q9UHD1 332 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ST3GAL5Q9UNP4 418 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 MYBL1P10243 752 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 KCNE1P15382 129 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 BRD2P25440 801 aaKnown RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 DNA2P51530 1060 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 ITIH3Q06033 890 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 PTPN11Q06124 597 aaPredicted RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 TWF2Q6IBS0 349 aaKnown RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 PPP1R2P3Q6NXS1 205 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 PHF13Q86YI8 300 aaPredicted RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 WHAMMQ8TF30 809 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 TFAP2BQ92481 460 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 C18orf25Q96B23 403 aaPredicted RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 FAM124BQ9H5Z6 455 aaPredicted RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 PARP2Q9UGN5 583 aa21.14■□□□□ 0.97
COPS7A-218ENST00000543939 UBQLN1Q9UMX0 589 aaKnown RBP21.14■□□□□ 0.97
COPS7A-218ENST00000543939 PCNTO95613 3336 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 SMIM28A0A1B0GU29 152 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 CILPO75339 1184 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 PAEPP09466 180 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 SSTR3P32745 418 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-218ENST00000543939 RAD23BP54727 409 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 RBM10P98175 930 aaKnown RBP21.13■□□□□ 0.97
COPS7A-218ENST00000543939 PTPROQ16827 1216 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 GLRA4Q5JXX5 417 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 LHX8Q68G74 356 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 ZNF564Q8TBZ8 553 aaPredicted RBP21.13■□□□□ 0.97
COPS7A-218ENST00000543939 TSEN34Q9BSV6 310 aaKnown RBP21.13■□□□□ 0.97
COPS7A-218ENST00000543939 EPC1Q9H2F5 836 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 KLK14Q9P0G3 267 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 PCDHGC3Q9UN70 934 aa21.13■□□□□ 0.97
COPS7A-218ENST00000543939 MOXD2PA6NHM9 499 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 LSM8O95777 96 aaKnown RBP21.12■□□□□ 0.97
COPS7A-218ENST00000543939 THPOP40225 353 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 MYO1EQ12965 1108 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 PTK7Q13308 1070 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 CCDC181Q5TID7 509 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 LRRC52Q8N7C0 313 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 ARRDC4Q8NCT1 418 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 MS4A14Q96JA4 679 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 VCPIP1Q96JH7 1222 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 PBKQ96KB5 322 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 HMX1Q9NP08 348 aaPredicted RBP21.12■□□□□ 0.97
COPS7A-218ENST00000543939 ALG6Q9Y672 507 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 KCNK3O14649 394 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 PPEF2O14830 753 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 GRK4P32298 578 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 PAFAH1B1P43034 410 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 TNNC1P63316 161 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 INCA1Q0VD86 236 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 PTP4A2Q12974 167 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 TRIM71Q2Q1W2 868 aaKnown RBP21.12■□□□□ 0.97
COPS7A-218ENST00000543939 CFAP221Q4G0U5 840 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 SLC4A11Q8NBS3 891 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 ELOVL4Q9GZR5 314 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 SMARCAL1Q9NZC9 954 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 EHD2Q9NZN4 543 aa21.12■□□□□ 0.97
COPS7A-218ENST00000543939 H2AFXP16104 143 aaPredicted RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 RRM1P23921 792 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 CDH5P33151 784 aaPredicted RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 CENPFP49454 3210 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 C1QBPQ07021 282 aaKnown RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 NFX1Q12986 1120 aaKnown RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 C9orf57Q5W0N0 161 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 TTC39CQ8N584 583 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 MSANTD4Q8NCY6 345 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 SPATA4Q8NEY3 305 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 TWNKQ96RR1 684 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 RPS6KC1Q96S38 1066 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 ZNF518BQ9C0D4 1074 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 ANKZF1Q9H8Y5 726 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 AGO3Q9H9G7 860 aaKnown RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 ERVK-5Q9HDB9 667 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 TRMT13Q9NUP7 481 aaKnown RBP21.11■□□□□ 0.97
COPS7A-218ENST00000543939 RNF19AQ9NV58 838 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 ADAM22Q9P0K1 906 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 HMGXB4Q9UGU5 601 aa21.11■□□□□ 0.97
COPS7A-218ENST00000543939 GPR182O15218 404 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 TLR3O15455 904 aaKnown RBP21.1■□□□□ 0.97
COPS7A-218ENST00000543939 DDX3YO15523 660 aaKnown RBP21.1■□□□□ 0.97
COPS7A-218ENST00000543939 XPOTO43592 962 aaKnown RBP21.1■□□□□ 0.97
COPS7A-218ENST00000543939 CD4P01730 458 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 MESDQ14696 234 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 FAM26DQ5JW98 314 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 FBXO47Q5MNV8 452 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 LIN9Q5TKA1 542 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 FBXO38Q6PIJ6 1188 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 TMEM35BQ8NCS4 154 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 UBE2Q2Q8WVN8 375 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 TMEM176AQ96HP8 235 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 GLT1D1Q96MS3 346 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 C11orf70Q9BRQ4 267 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 OSBPL7Q9BZF2 842 aa21.1■□□□□ 0.97
COPS7A-218ENST00000543939 BARX2Q9UMQ3 279 aaPredicted RBP21.1■□□□□ 0.97
COPS7A-218ENST00000543939 PIRO00625 290 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 MED7O43513 233 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 CD19P15391 556 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms