RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 DEFB119Q8N690 84 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 FANCBQ8NB91 859 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 GSTCDQ8NEC7 633 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 OR2I1PQ8NGU4 316 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 RPLP0P6Q8NHW5 317 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 ZNF461Q8TAF7 563 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 SLC7A3Q8WY07 619 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 MSANTD3Q96H12 275 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 CCDC136Q96JN2 1154 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 CEP170P1Q96L14 293 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 CAMK1GQ96NX5 476 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 JPH2Q9BR39 696 aaPredicted RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 LRRC2Q9BYS8 371 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 CXCL16Q9H2A7 254 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 SLKQ9H2G2 1235 aaPredicted RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 AVENQ9NQS1 362 aaPredicted RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 CEP72Q9P209 647 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 MTRRQ9UBK8 725 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 RCAN3Q9UKA8 241 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 NAP1L2Q9ULW6 460 aaPredicted RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 ASCC3Q8N3C0 2202 aaKnown RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 BPTFQ12830 3046 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 LAMA5O15230 3695 aa5.28□□□□□ -1.56
LIMS1-214ENST00000542845 SMG1Q96Q15 3661 aaKnown RBP5.28□□□□□ -1.56
LIMS1-214ENST00000542845 ITPR1Q14643 2758 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 LAMA1P25391 3075 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ARHGEF37A1IGU5 675 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 B4GALT5O43286 388 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 SH3BP5O60239 455 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 LZTS3O60299 673 aaPredicted RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 OPHN1O60890 802 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 MOSPD3O75425 235 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 DXOO77932 396 aaKnown RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 B3GAT3O94766 335 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 STBD1O95210 358 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 APBB3O95704 486 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ARF4P18085 180 aaPredicted RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 LIG1P18858 919 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 BCKDHBP21953 392 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 FGFR3P22607 806 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 AXLP30530 894 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ABCG1P45844 678 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 GALK1P51570 392 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 RAB15P59190 212 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 SEMA3BQ13214 749 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 DMC1Q14565 340 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 LAPTM4AQ15012 233 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 PTPAQ15257 358 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ZNF423Q2M1K9 1284 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ARHGAP29Q52LW3 1261 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 PMS2CLQ68D20 193 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 FSTL4Q6MZW2 842 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 SLC27A1Q6PCB7 646 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 IGSF10Q6WRI0 2623 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 CCNI2Q6ZMN8 369 aaPredicted RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ANKS3Q6ZW76 656 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 TMTC3Q6ZXV5 915 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 PIP4P1Q86T03 277 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 TMTC2Q8N394 836 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 ZNF843Q8N446 348 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 SHKBP1Q8TBC3 707 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 RLN3Q8WXF3 142 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 LRRC3BQ96PB8 259 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 CEP89Q96ST8 783 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 GPR88Q9GZN0 384 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 SMG9Q9H0W8 520 aaKnown RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 IL25Q9H293 177 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 TRPV4Q9HBA0 871 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 FBRSL1Q9HCM7 1045 aaKnown RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 GKN1Q9NS71 199 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 TMEM74BQ9NUR3 256 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 EVA1BQ9NVM1 165 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
LIMS1-214ENST00000542845 INSL5Q9Y5Q6 135 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 PCNX2A6NKB5 2137 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 CEP192Q8TEP8 1941 aa5.27□□□□□ -1.57
LIMS1-214ENST00000542845 PTPRBP23467 1997 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 SH2B2O14492 632 aaPredicted RBP5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CAPN9O14815 690 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TBX3O15119 743 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ATXN7O15265 892 aaPredicted RBP5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ASAP2O43150 1006 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TRAPPC3O43617 180 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 MICAL2O94851 1124 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ABLIM3O94929 683 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 FTH1P19P0C7X4 201 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CPB1P15086 417 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ATF2P15336 505 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ITPKBP27987 946 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CLCNKBP51801 687 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CDR1P51861 262 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 SEC13P55735 322 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 MARSP56192 900 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms