RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 TM4SF4P48230 202 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 ADAM17P78536 824 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 ZNF211Q13398 564 aaPredicted RBP21.45■■□□□ 1.02
OTUB1-210ENST00000541478 PLEKHA7Q6IQ23 1121 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 OSMRQ99650 979 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 UBXN6Q9BZV1 441 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 DDX47Q9H0S4 455 aaKnown RBP21.45■■□□□ 1.02
OTUB1-210ENST00000541478 ABT1Q9ULW3 272 aaKnown RBP21.45■■□□□ 1.02
OTUB1-210ENST00000541478 POLIQ9UNA4 740 aa21.45■■□□□ 1.02
OTUB1-210ENST00000541478 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.45■■□□□ 1.02
OTUB1-210ENST00000541478 KPNA6O60684 536 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 NPTXRO95502 500 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 STAU1O95793 577 aaKnown RBP21.44■■□□□ 1.02
OTUB1-210ENST00000541478 FGFR4P22455 802 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 MMP8P22894 467 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 POLR2BP30876 1174 aaKnown RBP21.44■■□□□ 1.02
OTUB1-210ENST00000541478 YARSP54577 528 aaKnown RBP21.44■■□□□ 1.02
OTUB1-210ENST00000541478 FCGRTP55899 365 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 RBP5P82980 135 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 NNTQ13423 1086 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 MMS22LQ6ZRQ5 1243 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 TTC39CQ8N584 583 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.44■■□□□ 1.02
OTUB1-210ENST00000541478 MGAMO43451 1857 aa21.44■■□□□ 1.02
OTUB1-210ENST00000541478 C17orf102A2RUQ5 167 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 DUSP11O75319 330 aaKnown RBP21.43■■□□□ 1.02
OTUB1-210ENST00000541478 HOXA11P31270 313 aaPredicted RBP21.43■■□□□ 1.02
OTUB1-210ENST00000541478 CDH5P33151 784 aaPredicted RBP21.43■■□□□ 1.02
OTUB1-210ENST00000541478 RUFY4Q6ZNE9 571 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 CXorf38Q8TB03 319 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 CAVIN3Q969G5 261 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 KIF12Q96FN5 646 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 HINFPQ9BQA5 517 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 TRIM6Q9C030 488 aaPredicted RBP21.43■■□□□ 1.02
OTUB1-210ENST00000541478 DPP3Q9NY33 737 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 ITGA4P13612 1032 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 MARCKSL1P49006 195 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 BEX3Q00994 111 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 PTP4A2Q12974 167 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 MAMLD1Q13495 774 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 CUL1Q13616 776 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 NME8Q8N427 588 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 DNAJB3Q8WWF6 145 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 HPDLQ96IR7 371 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 HHIPL1Q96JK4 782 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 AGAP1Q9UPQ3 857 aa21.43■■□□□ 1.02
OTUB1-210ENST00000541478 CITO14578 2027 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 PROSCO94903 275 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 SSTR3P32745 418 aaPredicted RBP21.42■■□□□ 1.02
OTUB1-210ENST00000541478 HSP90B2PQ58FF3 399 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 MFSD14CQ5VZR4 134 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 SND1Q7KZF4 910 aaKnown RBP eCLIP21.42■■□□□ 1.02
OTUB1-210ENST00000541478 C7orf31Q8N865 590 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 C1orf131Q8NDD1 294 aaKnown RBP21.42■■□□□ 1.02
OTUB1-210ENST00000541478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.42■■□□□ 1.02
OTUB1-210ENST00000541478 AMACRQ9UHK6 382 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 MTUS1Q9ULD2 1270 aa21.42■■□□□ 1.02
OTUB1-210ENST00000541478 TREHO43280 583 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 ALDH1A1P00352 501 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 CD19P15391 556 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 RAP1GAPP47736 663 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 PURAQ00577 322 aaKnown RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 TAP1Q03518 808 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 MYO1EQ12965 1108 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 C2CD6Q53TS8 623 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 IFT81Q8WYA0 676 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 LHX5Q9H2C1 402 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 STRIP2Q9ULQ0 834 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 HPCAL4Q9UM19 191 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 UTP11Q9Y3A2 253 aaKnown RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 RALGAPA2Q2PPJ7 1873 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 OAS2P29728 719 aaKnown RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 MAN1A1P33908 653 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 CARSP49589 748 aaKnown RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 IRX5P78411 483 aaPredicted RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 DHX34Q14147 1143 aaKnown RBP21.41■■□□□ 1.02
OTUB1-210ENST00000541478 FEZF2Q8TBJ5 459 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 WHAMMQ8TF30 809 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 SNX27Q96L92 541 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 RUNDC3BQ96NL0 473 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 RAB17Q9H0T7 212 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 SMYD3Q9H7B4 428 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 MED4Q9NPJ6 270 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 SNTG2Q9NY99 539 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 IP6K2Q9UHH9 426 aa21.41■■□□□ 1.02
OTUB1-210ENST00000541478 ESYT3A0FGR9 886 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 ZSCAN5CA6NGD5 496 aaPredicted RBP21.4■■□□□ 1.02
OTUB1-210ENST00000541478 TLR3O15455 904 aaKnown RBP21.4■■□□□ 1.02
OTUB1-210ENST00000541478 PSTPIP1O43586 416 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 CILPO75339 1184 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 C6orf222P0C671 652 aaPredicted RBP21.4■■□□□ 1.02
OTUB1-210ENST00000541478 PYGMP11217 842 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 HOXC8P31273 242 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 CHRNA3P32297 505 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 RAD23BP54727 409 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 SNX17Q15036 470 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 TAF2Q6P1X5 1199 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 PHLDB2Q86SQ0 1253 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 ERICH1Q86X53 443 aa21.4■■□□□ 1.02
OTUB1-210ENST00000541478 CASKIN2Q8WXE0 1202 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms