RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 EMC2Q15006 297 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 PDGFRLQ15198 375 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 HSF5Q4G112 596 aaPredicted RBP10.42□□□□□ -0.74
YBX3-211ENST00000541351 TTC30AQ86WT1 665 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
YBX3-211ENST00000541351 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 C22orf23Q9BZE7 217 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 TASP1Q9H6P5 420 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 TMEM74BQ9NUR3 256 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 SLC38A7Q9NVC3 462 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 NUB1Q9Y5A7 615 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 PI4KAP42356 2102 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 PIEZO2Q9H5I5 2752 aa10.42□□□□□ -0.74
YBX3-211ENST00000541351 CFAP46Q8IYW2 2715 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 A0A1W2PQD8 194 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 TMEM150BA6NC51 233 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 PTGESO14684 152 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
YBX3-211ENST00000541351 SLC28A2O43868 658 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 SEC24AO95486 1093 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 C6P13671 934 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 AVPR1AP37288 418 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 EIF2S3P41091 472 aaKnown RBP10.41□□□□□ -0.74
YBX3-211ENST00000541351 MBTD1Q05BQ5 628 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 C2orf27AQ580R0 203 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 PLA2G4FQ68DD2 849 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 MB21D2Q8IYB1 491 aaPredicted RBP10.41□□□□□ -0.74
YBX3-211ENST00000541351 MDGA1Q8NFP4 955 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 OLIG1Q8TAK6 271 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 SETD7Q8WTS6 366 aaKnown RBP10.41□□□□□ -0.74
YBX3-211ENST00000541351 RUFY2Q8WXA3 655 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 LENG9Q96B70 501 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 PNMA5Q96PV4 448 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 FAM83CQ9BQN1 747 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 EBF3Q9H4W6 596 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 PRMT7Q9NVM4 692 aaPredicted RBP10.41□□□□□ -0.74
YBX3-211ENST00000541351 FBXL5Q9UKA1 691 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 YIPF1Q9Y548 306 aa10.41□□□□□ -0.74
YBX3-211ENST00000541351 ATXN2Q99700 1313 aaKnown RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 PTPN13Q12923 2485 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 PRC1O43663 620 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 PSMD10O75832 226 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 RECQL4O94761 1208 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 STBD1O95210 358 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 RXRAP19793 462 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 ITPKAP23677 461 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 DDX6P26196 483 aaKnown RBP eCLIP10.4□□□□□ -0.74
YBX3-211ENST00000541351 GABRR2P28476 465 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 MARCKSP29966 332 aaPredicted RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 HNF1BP35680 557 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 CLCNKBP51801 687 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 RPL6Q02878 288 aaKnown RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 NBR1Q14596 966 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 VEPH1Q14D04 833 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 TAF12Q16514 161 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 CRY1Q16526 586 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 UPP1Q16831 310 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 SYCP2LQ5T4T6 812 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 CCDC43Q96MW1 224 aaKnown RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 CAMK1GQ96NX5 476 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 ZMYND12Q9H0C1 365 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 MMP17Q9ULZ9 603 aa10.4□□□□□ -0.74
YBX3-211ENST00000541351 V9GY48 417 aaPredicted RBP10.4□□□□□ -0.74
YBX3-211ENST00000541351 CNTNAP5Q8WYK1 1306 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 PLXNB3Q9ULL4 1909 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 TBX3O15119 743 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 P4HBP07237 508 aaKnown RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 ZNF883P0CG24 379 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 ITPKBP27987 946 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 UCNP55089 124 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 NPEPPSP55786 919 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 ANTXR2P58335 489 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 MRPS21P82921 87 aaKnown RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 HNRNPUQ00839 825 aaKnown RBP eCLIP10.39□□□□□ -0.75
YBX3-211ENST00000541351 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 AMHR2Q16671 573 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 PLEKHG6Q3KR16 790 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 IL27RAQ6UWB1 636 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 SLCO6A1Q86UG4 719 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 TMC8Q8IU68 726 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 ATP2A3Q93084 1043 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 LRRC3BQ96PB8 259 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 FNBP1Q96RU3 617 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 TOPORSQ9NS56 1045 aaPredicted RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 POLR3BQ9NW08 1133 aaPredicted RBP10.39□□□□□ -0.75
YBX3-211ENST00000541351 TBX20Q9UMR3 447 aa10.39□□□□□ -0.75
YBX3-211ENST00000541351 MYO9AB2RTY4 2548 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 FLRT2O43155 660 aa10.38□□□□□ -0.75
YBX3-211ENST00000541351 GJB3O75712 270 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms