RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PLSCR1O15162 318 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 FDX1P10109 184 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 SHMT1P34896 483 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 ZNF76P36508 570 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 ARFIP2P53365 341 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 THOC5Q13769 683 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 NFIXQ14938 502 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 SEPT7Q16181 437 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 CCDC142Q17RM4 750 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 RINLQ6ZS11 566 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 OTOP1Q7RTM1 612 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 ZNF276Q8N554 614 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 AMNQ9BXJ7 453 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 TMEM117Q9H0C3 514 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 MTO1Q9Y2Z2 717 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 WASF2Q9Y6W5 498 aa19.63■□□□□ 0.73
SFSWAP-207ENST00000538548 F8W8V4 182 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 CREB3O43889 395 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 ESRRAP11474 423 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 CDK16Q00536 496 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 MCL1Q07820 350 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 FASTKD3Q14CZ7 662 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 SMC1BQ8NDV3 1235 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 DDX1Q92499 740 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 VPS11Q9H270 941 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 AVENQ9NQS1 362 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 RARBP10826 455 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 BMP3P12645 472 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 SERPINB3P29508 390 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 PIK3CAP42336 1068 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 RAP1GDS1P52306 607 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 ZBTB16Q05516 673 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 CLEC16AQ2KHT3 1053 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 NACC1Q96RE7 527 aa19.62■□□□□ 0.73
SFSWAP-207ENST00000538548 CYP3A4P08684 503 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 NEK3P51956 506 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 C12orf56Q8IXR9 622 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 MANSC1Q9H8J5 431 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■■■ 72
SFSWAP-207ENST00000538548 DAGLAQ9Y4D2 1042 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 WDR91A4D1P6 747 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 ALOX15BO15296 676 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 TM9SF1O15321 606 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 ZCCHC18P0CG32 403 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 IL1R1P14778 569 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 DSG1Q02413 1049 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 GRAPQ13588 217 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 DDX50Q9BQ39 737 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 CENPKQ9BS16 269 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 TMEM206Q9H813 350 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 ZWILCHQ9H900 591 aa19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 FBXO6Q9NRD1 293 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-207ENST00000538548 IGLV3-22A0A075B6J6 115 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 K7ENM7 598 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 PSTPIP1O43586 416 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 CHMP2AO43633 222 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 RAD21O60216 631 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 TGDSO95455 350 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 PGM1P36871 562 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 LIN52Q52LA3 116 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 EFHC2Q5JST6 749 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 CAPN12Q6ZSI9 719 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 XXYLT1Q8NBI6 393 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 PLEKHO2Q8TD55 490 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 MRRFQ96E11 262 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 HAPLN3Q96S86 360 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 CBWD1Q9BRT8 395 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 TSSK1BQ9BXA7 367 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 IL1RAPL1Q9NZN1 696 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 COMMD3-BMI1R4GMX3 469 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 GREB1LQ9C091 1923 aaPredicted RBP19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 MAGEC1O60732 1142 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 CDK7P50613 346 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 SH3BGRP55822 239 aaPredicted RBP19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 GEMIN4P57678 1058 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 PPP2R5CQ13362 524 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 HP1BP3Q5SSJ5 553 aaPredicted RBP19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 ZBED8Q8IZ13 594 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 LMCD1Q9NZU5 365 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 FETUBQ9UGM5 382 aa19.6■□□□□ 0.73
SFSWAP-207ENST00000538548 TISP43B9A030 160 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 PSMD10O75832 226 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 CYP1A1P04798 512 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 MORF4L2Q15014 288 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 PABPC1LQ4VXU2 614 aaKnown RBP19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 ARMC3Q5W041 872 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 FAM91A1Q658Y4 838 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 IZUMO2Q6UXV1 221 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 TCP10LQ8TDR4 215 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 PRR11Q96HE9 360 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 TUBGCP5Q96RT8 1024 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 TMEM120AQ9BXJ8 343 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 KCNK13Q9HB14 408 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 ZNF536O15090 1300 aa19.59■□□□□ 0.73
SFSWAP-207ENST00000538548 ATP2A1O14983 1001 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms