RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ADPGKQ9BRR6 497 aa15.05■□□□□ -0
ACTN1-205ENST00000538545 SELENOOQ9BVL4 669 aa15.05■□□□□ -0
ACTN1-205ENST00000538545 CYTH4Q9UIA0 394 aa15.05■□□□□ -0
ACTN1-205ENST00000538545 FAM193AP78312 1265 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 FAM47CQ5HY64 1035 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 DENND1BQ6P3S1 775 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 KRT222Q8N1A0 295 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
ACTN1-205ENST00000538545 HERPUD2Q9BSE4 406 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 TRIM51Q9BSJ1 452 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 GCOM2Q9BZD3 368 aaPredicted RBP15.04■□□□□ -0
ACTN1-205ENST00000538545 FAM53CQ9NYF3 392 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 MBLAC1A4D2B0 266 aaPredicted RBP15.04■□□□□ -0
ACTN1-205ENST00000538545 TTI1O43156 1089 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 ERLIN1O75477 346 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 EIF4BP23588 611 aaKnown RBP15.04■□□□□ -0
ACTN1-205ENST00000538545 PEX5P50542 639 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 LACTBP83111 547 aaPredicted RBP15.04■□□□□ -0
ACTN1-205ENST00000538545 POU5F1BQ06416 359 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 SNX17Q15036 470 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 ATP13A4Q4VNC1 1196 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 SND1Q7KZF4 910 aaKnown RBP eCLIP15.04■□□□□ -05e-7■□□□□ 8.3
ACTN1-205ENST00000538545 C12orf29Q8N999 325 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 WHAMMQ8TF30 809 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 CASKIN2Q8WXE0 1202 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 HPDLQ96IR7 371 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 DPP3Q9NY33 737 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 CNTN6Q9UQ52 1028 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 ATP8B3O60423 1300 aa15.04■□□□□ -0
ACTN1-205ENST00000538545 MAP2K7O14733 419 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 KIF3CO14782 793 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 CA12O43570 354 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 SSR1P43307 286 aaKnown RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 CPT1AP50416 773 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 BPIFB4P59827 614 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 PTP4A2Q12974 167 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 MSL3Q8N5Y2 521 aaKnown RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 C7orf31Q8N865 590 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 HNRNPLLQ8WVV9 542 aaKnown RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 ELOVL4Q9GZR5 314 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 ZNF236Q9UL36 1845 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 TARSL2A2RTX5 802 aaKnown RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 RRN3P2A6NIE6 340 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 HAS3O00219 553 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 CCND3P30281 292 aaPredicted RBP15.03■□□□□ -0
ACTN1-205ENST00000538545 HTRA3P83110 453 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 ITIH3Q06033 890 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 MAMLD1Q13495 774 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 SURF1Q15526 300 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 RASGEF1CQ8N431 466 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 CD101Q93033 1021 aa15.03■□□□□ -0
ACTN1-205ENST00000538545 GOLGA8SH3BPF8 625 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 RECQL4O94761 1208 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 IL18RAPO95256 599 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 AKR1A1P14550 325 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 AFF1P51825 1210 aaKnown RBP15.02■□□□□ -0
ACTN1-205ENST00000538545 AP3M2P53677 418 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 RAD23BP54727 409 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 TAS2R40P59535 323 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 SMC1AQ14683 1233 aaKnown RBP15.02■□□□□ -0
ACTN1-205ENST00000538545 C11orf63Q6NUN7 778 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 ZNF410Q86VK4 478 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 UBA3Q8TBC4 463 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 RNF186Q9NXI6 227 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 RNF14Q9UBS8 474 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 KCNJ1P48048 391 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 SREBF2Q12772 1141 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 ANKS1BQ7Z6G8 1248 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 TSEN2Q8NCE0 465 aaKnown RBP15.02■□□□□ -0
ACTN1-205ENST00000538545 ARRDC4Q8NCT1 418 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 SOCS4Q8WXH5 440 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 C18orf8Q96DM3 657 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 NEUROG2Q9H2A3 272 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 DPH5Q9H2P9 285 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 NME7Q9Y5B8 376 aa15.02■□□□□ -0
ACTN1-205ENST00000538545 SMIM35A0A1B0GVV1 85 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 C17orf102A2RUQ5 167 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 TLR3O15455 904 aaKnown RBP15.02□□□□□ -0.01
ACTN1-205ENST00000538545 HADHBP55084 474 aaKnown RBP15.02□□□□□ -0.01
ACTN1-205ENST00000538545 NFX1Q12986 1120 aaKnown RBP15.02□□□□□ -0.01
ACTN1-205ENST00000538545 NBPF20Q3BBV1 942 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 CCDC70Q6NSX1 233 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 SLC4A11Q8NBS3 891 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 CCDC102AQ96A19 550 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 MCEEQ96PE7 176 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 HEMGNQ9BXL5 484 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 UVRAGQ9P2Y5 699 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 PARP2Q9UGN5 583 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 SNX9Q9Y5X1 595 aa15.02□□□□□ -0.01
ACTN1-205ENST00000538545 MYO1FO00160 1098 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 IGHA2P01877 340 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 CYBAP13498 195 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 OAS2P29728 719 aaKnown RBP15.01□□□□□ -0.01
ACTN1-205ENST00000538545 TM4SF4P48230 202 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 INHBEP58166 350 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 OGDHQ02218 1023 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-205ENST00000538545 CCDC142Q17RM4 750 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms