RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NOMO3P69849 1222 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 SKOR1P84550 965 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 GPS1Q13098 491 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 ATF7IP2Q5U623 682 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 TFAP2BQ92481 460 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 FDXACB1Q9BRP7 624 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 TMEM121Q9BTD3 319 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 RNPEPQ9H4A4 650 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 MRPL47Q9HD33 250 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 STAM2O75886 525 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 PROSCO94903 275 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 HSPA6P17066 643 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 PSMC1P62191 440 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 FAM133BQ5BKY9 247 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 GLRA4Q5JXX5 417 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 C7orf31Q8N865 590 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 FEZF2Q8TBJ5 459 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 ARHGEF2Q92974 986 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 RPF1Q9H9Y2 349 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 ZNF112Q9UJU3 913 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 RIPK2O43353 540 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 TOM1L1O75674 476 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ARL2P36404 184 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ARSEP51690 589 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 OAZ1P54368 228 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 SNRPFP62306 86 aaKnown RBP9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ATP11AP98196 1134 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 DENND1BQ6P3S1 775 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 METTL7BQ6UX53 244 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ENOSF1Q7L5Y1 443 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 TADA2BQ86TJ2 420 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 CACNA2D3Q8IZS8 1091 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 OPTNQ96CV9 577 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ANKRD36BP1Q96IX9 119 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PDLIM7Q9NR12 457 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PARP2Q9UGN5 583 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 SYNJ2BP-COX16A0A087WUM0 186 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 NFICP08651 508 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 MAGEA9P43362 315 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 NFX1Q12986 1120 aaKnown RBP9.22□□□□□ -0.93
UBE3B-208ENST00000538070 FAM47EQ6ZV65 393 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 MICALCLQ6ZW33 695 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 ZC3H18Q86VM9 953 aaKnown RBP9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 TMEM35BQ8NCS4 154 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PPM1EQ8WY54 764 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 CD101Q93033 1021 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 SENP7Q9BQF6 1050 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 PARVAQ9NVD7 372 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 COX16Q9P0S2 106 aa9.22□□□□□ -0.93
UBE3B-208ENST00000538070 WDR91A4D1P6 747 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 MAPK13O15264 365 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 KRT15P19012 456 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 PLCB4Q15147 1175 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 ZNF667Q5HYK9 610 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 CD302Q8IX05 232 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 CCDC13Q8IYE1 715 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 LRRC34Q8IZ02 419 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 ATL2Q8NHH9 583 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 SNF8Q96H20 258 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 SMYD3Q9H7B4 428 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 NFASCO94856 1347 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 M0QYV0 167 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 OGTO15294 1046 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 INSRRP14616 1297 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 ACO1P21399 889 aaKnown RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 RFC1P35251 1148 aaPredicted RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 SLMAPQ14BN4 828 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 GKAP1Q5VSY0 366 aaPredicted RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 MON1BQ7L1V2 547 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 GPC2Q8N158 579 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 DNERQ8NFT8 737 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 XPO6Q96QU8 1125 aaKnown RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 NIF3L1Q9GZT8 377 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 FAM49BQ9NUQ9 324 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 HMGXB4Q9UGU5 601 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 DDX20Q9UHI6 824 aaKnown RBP9.21□□□□□ -0.93
UBE3B-208ENST00000538070 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 HES2Q9Y543 173 aa9.21□□□□□ -0.93
UBE3B-208ENST00000538070 RPS6KA5O75582 802 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 FAM107AO95990 144 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 MNAT1P51948 309 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 EIF3BP55884 814 aaKnown RBP9.21□□□□□ -0.94
UBE3B-208ENST00000538070 GRM1Q13255 1194 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 TAF5Q15542 800 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 RFX6Q8HWS3 928 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 JOSD2Q8TAC2 188 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 AFG1LQ8WV93 481 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 TRIM11Q96F44 468 aa9.21□□□□□ -0.94
UBE3B-208ENST00000538070 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms