RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 ZMAT2Q96NC0 199 aaKnown RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 MKNK1Q9BUB5 465 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 DNAJC25Q9H1X3 360 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 THG1LQ9NWX6 298 aaKnown RBP12.2□□□□□ -0.46
CLPB-208ENST00000538021 OBP2AQ9NY56 170 aa12.2□□□□□ -0.46
CLPB-208ENST00000538021 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 EGFP01133 1207 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 XBP1P17861 261 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 PSMA5P28066 241 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 GABRR2P28476 465 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
CLPB-208ENST00000538021 GRM5P41594 1212 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 PPP2R5AQ15172 486 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 ALKAL1Q6UXT8 129 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
CLPB-208ENST00000538021 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
CLPB-208ENST00000538021 SMG9Q9H0W8 520 aaKnown RBP12.19□□□□□ -0.46
CLPB-208ENST00000538021 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 GKN1Q9NS71 199 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 SLC27A5Q9Y2P5 690 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
CLPB-208ENST00000538021 PATE3B3GLJ2 98 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
CLPB-208ENST00000538021 VNN2O95498 520 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 APBB3O95704 486 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 HSPA4P34932 840 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 MCM2P49736 904 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 DGKEP52429 567 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 CYP4F8P98187 520 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 YWHAHQ04917 246 aaPredicted RBP12.18□□□□□ -0.46
CLPB-208ENST00000538021 RUNX3Q13761 415 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
CLPB-208ENST00000538021 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 TRIM68Q6AZZ1 485 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 C19orf48Q6RUI8 117 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 IFT74Q96LB3 600 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 EBF3Q9H4W6 596 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 SLC32A1Q9H598 525 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 KLK13Q9UKR3 277 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 TNFSF13BQ9Y275 285 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
CLPB-208ENST00000538021 TIMM13Q9Y5L4 95 aaPredicted RBP12.18□□□□□ -0.46
CLPB-208ENST00000538021 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 K7ERI5 159 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 TRDMT1O14717 391 aaKnown RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 DTNBO60941 627 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 CDC45O75419 566 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 SOAT2O75908 522 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 ZIC2O95409 532 aaPredicted RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 FGF19O95750 216 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 KCNE1P15382 129 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 CYP11B2P19099 503 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLPB-208ENST00000538021 EFNA5P52803 228 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 AMPD2Q01433 879 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 NR5A1Q13285 461 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 CYP2U1Q7Z449 544 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 CDT1Q9H211 546 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 TASP1Q9H6P5 420 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 FBRSL1Q9HCM7 1045 aaKnown RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
CLPB-208ENST00000538021 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
CLPB-208ENST00000538021 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
CLPB-208ENST00000538021 ITPR1Q14643 2758 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 SPAARA0A1B0GVQ0 90 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 OTOL1A6NHN0 477 aaPredicted RBP12.16□□□□□ -0.46
CLPB-208ENST00000538021 NEMFO60524 1076 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 MED24O75448 989 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 OAZ2O95190 189 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 SEC24BO95487 1268 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 DRD1P21728 446 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
CLPB-208ENST00000538021 GALK1P51570 392 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 IRX4P78413 519 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 PSMD2Q13200 908 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 GPR17Q13304 367 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 DMC1Q14565 340 aa12.16□□□□□ -0.46
CLPB-208ENST00000538021 USP39Q53GS9 565 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms